| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_3488 |
|---|
| Symbol | ubiA |
|---|
| ID | 7858380 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 3882742 |
|---|
| End bp | 3883644 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 643867588 |
|---|
| Product | prenyltransferase |
|---|
| Protein accession | YP_002883492 |
|---|
| Protein GI | 229821966 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.327283 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGGGAGG TGCTCGCCGC GTCGCGGCCG TTCTCGTGGA TCAACACGGC GTACCCGTTC
GCCGCGGGGA TGCTCGTGGC GACCCAAGGC CGGCTCGACG TCGCCGGCTG GGTGACGTTC
GCCGTCGGCA CGCTCTTCTT CCTCGTGCCC TACAACCTCC TGATGTACGG CGTGAACGAC
GTCTTCGACT ACTCGTCCGA CCTCGCGAAC CCCCGCAAGG GCGGCATCGA GGGCGGCCTC
GTCGCGCCGG AGCGGGCGCG TGTGGTGCAC CGGCGGATCG TCGTCGCGAG CGTGGCGACG
ACGACGCCGT TCGTCGTCGC GCTCCTCGCG CTCGGCTCCG GCGGGAGGCT GGGCGGGGTG
CCGCCGTGGC CGTCGCTGAC GCTGCTCGTC GTCGTGTTCG GTGTCGTCGC GTACTCGGCG
CCGGAGATGC GGTTCAAGGA ACGCCCGGTG CTCGACTCGT TCACGTCGGC GATGCACTTT
GCCGGGCCGT TGCTGTACGC GCTGGTGCTC GTCGGCGCGC CGCTGACGGC GCGAGCGGTG
TGGCCCGCCG TGGTCGCCTT CGTGGTGTGG GGGATGGCGT CGCACGCGTT CGGCGCGGTG
CAGGACGTGC GGGCGGACCG GACCGGCGGG ATCGCGTCGG TGGCGACGGC GCTCGGCGCG
CGGACGACGG TGCGGCTGGT GGTCGGCGCG TACGTGCTCT CCGCCGCCGC GCTCGCGGTG
CTGCCGTGGC CGGGCTGGCT GGCGGCGGTG CTGCCCCTGG CGTACGCGGC GAACGCGGCG
CGGTTCCTCG ACGTCACCGA CGACGACTGC GAGCGCGCGA ACGCCGGCTG GCGCGTCTTC
CTCCGCCTCA ACCTCGTGGC CGGGGCGGCC GTCACGATCC TGCTGCTCGC CGCGAACCAC
TGA
|
|---|
| Protein sequence | MREVLAASRP FSWINTAYPF AAGMLVATQG RLDVAGWVTF AVGTLFFLVP YNLLMYGVND
VFDYSSDLAN PRKGGIEGGL VAPERARVVH RRIVVASVAT TTPFVVALLA LGSGGRLGGV
PPWPSLTLLV VVFGVVAYSA PEMRFKERPV LDSFTSAMHF AGPLLYALVL VGAPLTARAV
WPAVVAFVVW GMASHAFGAV QDVRADRTGG IASVATALGA RTTVRLVVGA YVLSAAALAV
LPWPGWLAAV LPLAYAANAA RFLDVTDDDC ERANAGWRVF LRLNLVAGAA VTILLLAANH
|
|---|
| |