Gene Bcav_3372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3372 
Symbol 
ID7860338 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3755963 
End bp3756748 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content76% 
IMG OID643867471 
Productamidohydrolase 2 
Protein accessionYP_002883376 
Protein GI229821850 
COG category[R] General function prediction only 
COG ID[COG3618] Predicted metal-dependent hydrolase of the TIM-barrel fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0801075 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.412706 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGCGA TCGACGCGGA CTTCGGCATC TCCGACCTGG CCCCGCTCGC CGCGGCCGAG 
GGCGTCAGCC GCGCCGTCGT CGTCGAGACG GTCAGCTCCG AGGCCGAGAC GCTCGACCTG
CTCGCGCTCG CGGCGACCGA TCGGCTGATC GCCGGCGTGG TCGGGTGGGT CGATCTCGCC
GCCGACGACG TCGCCGCACG GCTCGCCGCG ATGCGTCGCT CGCCCGGCGG CGAGGCTCTC
GTCGGCGTGC GCCACCAGGT GCAGGGGGAG GACGACCCGG GCTTCCTCGA CCGGCCCGAG
GTGCGGCGGG GCGTCGCGGC CGTCGCCGAC GCGGGTCTCG CGTTCGACGT CGTGATCCGG
CACGAGCAGC TGCCGCAGGT CGTGCGCCTC GCGCGCGAGG TGCCCCAGGT CCGGCTCGTG
CTCGACCACC TCGGGAAACC CGATCTCGCC GGCGGCGACC TGGCGGCGTG GCGCCGCGAC
CTGAGCGCGC TCGCCGAGGC GCCGAACGTC GTCGCGAAGG TGTCGGGGCT CGTGACGGAG
GCGCGCTGGG ACGGATGGTC GACGGCCGAC CTGCGCCCCG CCGTCGTCCA TGCGCTCGAC
ACGTTCGGAC CGGGCCGGCT GGTGTTCGGC TCGGACTGGC CGGTGGTGAA CCTCGCGGGC
GGGTACGCGC GCTGGGTGCT CGCCTACGAC GAGCTGACGG CTGAGCTCAC CGAGGACGAG
CGCGCCGCGA TCGACCGGGC GACGGCGGAG CGGGTCTACC GCCTCGCCGC GGGGGAGACG
GCGTGA
 
Protein sequence
MAAIDADFGI SDLAPLAAAE GVSRAVVVET VSSEAETLDL LALAATDRLI AGVVGWVDLA 
ADDVAARLAA MRRSPGGEAL VGVRHQVQGE DDPGFLDRPE VRRGVAAVAD AGLAFDVVIR
HEQLPQVVRL AREVPQVRLV LDHLGKPDLA GGDLAAWRRD LSALAEAPNV VAKVSGLVTE
ARWDGWSTAD LRPAVVHALD TFGPGRLVFG SDWPVVNLAG GYARWVLAYD ELTAELTEDE
RAAIDRATAE RVYRLAAGET A