Gene Bcav_3365 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3365 
Symbol 
ID7860331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3745821 
End bp3746984 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content72% 
IMG OID643867464 
Productoxidoreductase domain protein 
Protein accessionYP_002883369 
Protein GI229821843 
COG category[R] General function prediction only 
COG ID[COG0673] Predicted dehydrogenases and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.23221 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0569216 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCC GCACCCTGCG CATCGCCATG AACGGCATCA CCGGCCGCAT GGGCTACCGC 
CAGCACCTGC TCCGCTCGAT CCTGCCGATC CGGGACGCGG GCGGCCTCGA CCTCCCCGAC
GGCACCCGCC TCGCCGTCGA ACCGGTGCTC GTCGGCCGCA ACGAGGAGCG CATCCGCCGG
ATCGCCGAGC AGCACGACGT CAAGGAGTGG TCCACCGACC TCGACGCGGT CCTCGCGGAC
CCGAGCATCG ACGTCTACTT CGACTCCCAG GTCACCTCGC AGCGCGTCGC GGCGCTCACG
AAGGCGATCG ACGCCGGCAA GCACATCTAC ACCGAGAAGC CGACCGCGGA GCGCCTCGAC
GAGGCCATCG ACCTCGCGAA GCGGGGCGCG GCGAGTGGGC TCACGATCGG CGTCGTGCAC
GACAAGCTCT ACCTGCCCGG CCTCGTCAAG CTGCGGAGGC TCGTGGACGA GGGCTTCTTC
GGCCGCATCC TGTCGTTGCG GGGCGAGTTC GGGTACTGGG TCTTCGAGGG GGAGATCCAG
AGCGCCCAGC GCCCGAGCTG GAACTACCGC GCCGAGGACG GCGGCGGTAT CACCACCGAC
ATGTTCTGCC ACTGGAACTA CGTGCTGGAG GGCATCGTCG GCCGGGTCCG CACCGTGAGC
GCGCAGACCG CCACCCACAT CCCCACCCGC TGGGACGAGC GCGGCGAGGC GTACCCCGCC
ACCGCCGACG ACGCCGCGTA CGGCACGTTC CAGCTCACGA CTCCCGACGG CGACGACGTC
GTCGCCCAGA TCAACTCCTC CTGGGCGGTG CGCGTGCACC GCGACGAGCT CGTCGAGTTC
CAGGTCGACG GCACGCACGG CTCGGCGGTC GCCGGCCTGT TCGGCTGCGT CGCGCAGCAG
CGCGCCCACA CGCCGCGCCC GGTGTGGAAC CCGGACCTCC CCACCACGGA GCGCTTCCGC
GAGCAGTGGC TCGACGTCCC CGACAACGCC GAGGTCACCA ACGGCTTCCG CGTGCAGTGG
GAGGAGTTCC TGCGCGACGT CGCCGCGGGG CGTCCGCACC GCTACGACCT CCTCTCCGCC
GCGCGCGGGG TGCAGCTCGC CGAGCTGGGC CTCGCGAGCT CCGCGCAGGG CCGGCGGCTC
GACGTCCCGG AGATCGTGCT GTGA
 
Protein sequence
MTTRTLRIAM NGITGRMGYR QHLLRSILPI RDAGGLDLPD GTRLAVEPVL VGRNEERIRR 
IAEQHDVKEW STDLDAVLAD PSIDVYFDSQ VTSQRVAALT KAIDAGKHIY TEKPTAERLD
EAIDLAKRGA ASGLTIGVVH DKLYLPGLVK LRRLVDEGFF GRILSLRGEF GYWVFEGEIQ
SAQRPSWNYR AEDGGGITTD MFCHWNYVLE GIVGRVRTVS AQTATHIPTR WDERGEAYPA
TADDAAYGTF QLTTPDGDDV VAQINSSWAV RVHRDELVEF QVDGTHGSAV AGLFGCVAQQ
RAHTPRPVWN PDLPTTERFR EQWLDVPDNA EVTNGFRVQW EEFLRDVAAG RPHRYDLLSA
ARGVQLAELG LASSAQGRRL DVPEIVL