| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_3323 |
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| Symbol | |
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| ID | 7860289 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | - |
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| Start bp | 3683553 |
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| End bp | 3685211 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643867423 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_002883328 |
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| Protein GI | 229821802 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.175879 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.023879 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGACGA CGAGGAGACG CAACGCGGCG GCCGTCGTCG CCGCGGCGCT GGCGATCACG
CTGGCGGCCT GTTCCAGCGA CGGGGGATCC GAGGATGAGA CGCCGGACGA GAGCGAGCTC
GGTCAGGTCG GCGCGATGGA GGACTACGAC GTCGGGACGA CGTTCGTGGC GACCGAACCG
GTGGAGTTCG GGCTCCTGTA CCGGGACCAC CCGAACTACC CGCTGCAGGA GGACTGGCTC
CTCCTGCAGT CGCTCGAGGA GGACCACAAC GTCAGCTTCG ACATCACGAG CGCGCCGCTC
GCCGAGTGGG ACCAGCGCAA GGGCCTGCTC ATCGGCGCGG GCGACGCTCC CGAGATCATC
TCGGTCACCT ACCCGGGCCA GGAGGTCCAG TTCGTCGCCG GAGGGGCGAT CCTGCCCGTC
AGCGACTACC TGCAGTACCT GCCGAACTTC ACGGCGAAGG TCGAGGAGTG GGGCCTCGAG
GAGGCGCTCG ACCAGCGCCG TCAGGAGGAC GGCAAGTTCT ACATGCTGCC CGGCCTGCGG
GAGTCGGACC GTCCCATGTA CACGTACGCG GTGCGGGCCG ACGTCTGGGA GGAGCTCGGC
CTCAGCCTCG AGCCGGCGAG CTTCGACGAG TTCGCCGACC AGCTGCGCAC CGTCCACGAG
GCCTACCCGG ACGTGTGGCC GCTCTCGGAC CGCTGGTCCG CGAACGGGCC GCTCGAGGCG
ACCCTCAACT TCGCCGCCCC GAACTTCGGC ACGTCCGCCG GGTGGGGTTA CGGCGAGGGT
GTCACGTGGG ACGCCGACGC CGAGGAGTTC GTGTACACGG GGGCCACGGA GGAGTACCGC
GCTCTGCTGG AGTACTACAA CGGCCTCATC ACCGACGGCC TCATGGACCC GGAGAGCCTG
ACGCAGGACG ACGACCAGGC CATCCAGAAG TTCGGCTCCG GTCAGTCGAT GGCGATCGCC
GCGAACGACC AGGAGATCCT GCGCTACCGC GACACGTTCA CCGAGCTCGG GACGGACGCC
GAGACGGCGC TGATCCGGGT TCCCGCCGGC CCGGCCGGTG ACAACGTGCC CGCCGGCACG
CGCCTGCAGA GCGGCCTCAT GATCTCCGCC GACGCCGCCG ACAGCGACCA CTTCCTCGCG
CTGCTGCAGT TCATCGACTG GCTGTACTAC TCCGACGAGG GCCTCGAGTT CGCCAAGTGG
GGCGTCGAGG GCGAGACCTT CACCTGGGAC GGCGAGACGC GCGTCCTCGT CGACGACATC
GACATCAACG GCCTCAACCC CGGCGCCCCC ACGCAGCTCA ACGTGGACTA CGGCTTCCAC
AACGGGGTGT GGATGCTGGA GCACGGCTCC ACCGACGACC TCGACCAGTC GATGCTCCGG
CCCGAGGTGA TCGACTTCGT CGAGTCGATG TCGAACCGCG AGGAGCTGAC GCTGCCGCCG
CCGTGGCCGC TCAACGAGAT GGAACGCGAG CAGGTCTCGC TCCTGCAGAC CGCGCTCAAG
GACCACGTCT GGCAGAACAC CGCGGCGTTC ATCCTCGGTC AGCGGTCCTT CGACGAGTGG
GACGCCTACG TCGCCGAGCT CGAGGGCCTG AACGTGCAGC AGTACCTCGA CGTCGCGAAC
ACCGCGCAGG AGCGTTTCGC GGAGAGCAGC TCCGAGTAG
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| Protein sequence | MRTTRRRNAA AVVAAALAIT LAACSSDGGS EDETPDESEL GQVGAMEDYD VGTTFVATEP
VEFGLLYRDH PNYPLQEDWL LLQSLEEDHN VSFDITSAPL AEWDQRKGLL IGAGDAPEII
SVTYPGQEVQ FVAGGAILPV SDYLQYLPNF TAKVEEWGLE EALDQRRQED GKFYMLPGLR
ESDRPMYTYA VRADVWEELG LSLEPASFDE FADQLRTVHE AYPDVWPLSD RWSANGPLEA
TLNFAAPNFG TSAGWGYGEG VTWDADAEEF VYTGATEEYR ALLEYYNGLI TDGLMDPESL
TQDDDQAIQK FGSGQSMAIA ANDQEILRYR DTFTELGTDA ETALIRVPAG PAGDNVPAGT
RLQSGLMISA DAADSDHFLA LLQFIDWLYY SDEGLEFAKW GVEGETFTWD GETRVLVDDI
DINGLNPGAP TQLNVDYGFH NGVWMLEHGS TDDLDQSMLR PEVIDFVESM SNREELTLPP
PWPLNEMERE QVSLLQTALK DHVWQNTAAF ILGQRSFDEW DAYVAELEGL NVQQYLDVAN
TAQERFAESS SE
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