| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_3279 |
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| Symbol | |
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| ID | 7861751 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | + |
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| Start bp | 3634977 |
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| End bp | 3636413 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 643867379 |
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| Product | DNA repair protein RadA |
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| Protein accession | YP_002883284 |
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| Protein GI | 229821758 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1066] Predicted ATP-dependent serine protease |
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| TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.491227 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00533763 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCGGCGC CGGGCGTTAA CGTCACGGCC ATGACCACCA CCCCGCGCAC CGCGCGCACG
CCGAAGGCCG AGTACCGGTG CGCGGAGTGC GGGTGGCAGA CGGCGAAGTG GGTCGGCCGG
TGCGGTGAGT GCCAGGCCTG GGGCACCGTC GAGGAGGCAG CCGGCGGAAG CGTCGCCGTC
GGCCGGGGCA CGGCCGCGCT CGCCCCGGCG TCCCCCGCCG TCCCGATCGA CCAGGTCGAC
ACCGACCTCG TGCGGCTGCA GCCGACCGGC GTCGGCGAGC TGGACCGCGT GCTCGGGGGT
GGGCTCGTGC CCGGGGCTGT CGTGCTGCTC GCCGGCGAAC CCGGCGTCGG CAAGTCGACG
CTGCTGCTCG ACGTCGCCGC CAAGGCCGCG ACGAGCGGCA CCGGTCGCCG CGTGCTGTAC
GTGACGGGCG AGGAGTCGGC CTCCCAGGTC CGGCTGCGCG CCGAACGCAT CGGTGCCCTG
CGGCCGCGCC TGTACCTCGC CGCCGAGTCC GACCTGGCCA CCGTGCTCGG CCAGATCGAG
GCGTGCGATC CGCAGCTGCT TGTGCTCGAC TCGGTGCAGA CGATCGCGTC GGCGGACGTC
GACGGCGCCG CGGGCGGTGT CGCGCAGGTG CGGGCCGTCG CGGCCGCGAT CATCGCCGTC
GCCAAGCGCA AGCACCTCCC GGTGCTGCTC GTCGGGCACG TGACGAAGGA CGGCGGGATC
GCCGGGCCGC GCGTGCTCGA GCACCTCGTC GACGTCGTCT GCCAGTTCGA GGGCGACAGG
CACTCCCGGC TCCGCATGGT CCGCGCCGTC AAGAACAGGT ACGGCCCGAC CGACGAGGTG
GGGTGCTTCG ACCTGACGGA CAGCGGCATC GAGGGTCTGC CGGATCCCAG CGGTCTCTTC
CTGTCCGGCA GCGGCCTCGT CCAGCCAGGC ACCTGTGCCA CCGTCACGCT CGACGGCCGC
CGACCCATGC CGATCGAGAT CCAGGCTCTG GTCACGCCGG GCACGGAGAA GCACCCGCGC
CGGGCGACGT CCGGCGTCGA GTCCTCCCGT GTCAACATGA CCCTCGCGGT GCTCCAGGCC
CTTCTCGACG TCCGGCTCGG GGGCTGCGAC GTGTTCGTGT CGACGATCGG CGGAGCCCGC
GCCGTCGAGC CCGCTGCCGA CATCGCCGTC GCCCTCGCCG TCGCGAGCGC GGAGACCGGT
CGCGTGATCC GAGCCGGCCT CGTCGCGATC GGCGAGGTCA GCCTCGCCGG TGAGCTGCGC
CCGACGGTCG GGATCGACCG GAGGCTGGCG GAGGCCGCGC GCCTCGGCTT CACCTCGGCG
GTGGTCCCGG CGCGCACCGC CCGTGAGGCG CGGGCTCCGG AAGGGCTGCG CCTCCTCCCC
GCGGCGAGCC TCGCCGAGGC CGCTCAGCAC GCTCTGGCGG GGCTGTCGCT CGCGTAG
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| Protein sequence | MSAPGVNVTA MTTTPRTART PKAEYRCAEC GWQTAKWVGR CGECQAWGTV EEAAGGSVAV
GRGTAALAPA SPAVPIDQVD TDLVRLQPTG VGELDRVLGG GLVPGAVVLL AGEPGVGKST
LLLDVAAKAA TSGTGRRVLY VTGEESASQV RLRAERIGAL RPRLYLAAES DLATVLGQIE
ACDPQLLVLD SVQTIASADV DGAAGGVAQV RAVAAAIIAV AKRKHLPVLL VGHVTKDGGI
AGPRVLEHLV DVVCQFEGDR HSRLRMVRAV KNRYGPTDEV GCFDLTDSGI EGLPDPSGLF
LSGSGLVQPG TCATVTLDGR RPMPIEIQAL VTPGTEKHPR RATSGVESSR VNMTLAVLQA
LLDVRLGGCD VFVSTIGGAR AVEPAADIAV ALAVASAETG RVIRAGLVAI GEVSLAGELR
PTVGIDRRLA EAARLGFTSA VVPARTAREA RAPEGLRLLP AASLAEAAQH ALAGLSLA
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