Gene Bcav_3271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3271 
Symbol 
ID7861743 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand- 
Start bp3626287 
End bp3627297 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content74% 
IMG OID643867371 
ProductAlcohol dehydrogenase zinc-binding domain protein 
Protein accessionYP_002883276 
Protein GI229821750 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases 
TIGRFAM ID[TIGR01202] 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0405628 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCGCG CCGTTCTGCA CGGAGTCGGG GACCTGCGAC TCGAGGAAGG TCCCGACCCC 
GAGGTCCCGG AGGGCTTCAC GCTGGTCCGG ATGACCGACG TCGGTCTGTG CGGGAGCGAC 
CTGCACTGGT TCAGCGAAGG CGGTATCGGC GACGCGCGGC TGACCCGGCC GATCGTGCCC 
GGGCACGAGC AGGCCGGGAT CGCGCAGGAC GGGCCGTACG CGGGCCGGCT CGTCGCCGTC 
GACCCCGCCA TCCCGTGCGG GCGGTGCGAG ATGTGCCTGG AGGGCGAGGT CAACCTCTGC 
CCGACGGTGC GGTTCTCCGG GCACGGTGCG CTGGACGGCG GGCTGCAGGA GCTGCTCGCG 
TGGCCGACGG ACCGCCTCTT CCCGCTCCCG GACGGCATGA CCGGCGCCGA CGGCGCGGTG 
CTCGAGCCGC TCGGGGTGGC CCTGCACGCC TGGGACCTCG CTCACGTGCG CGCGGCGTCC 
GACGTCGTCG TCGTCGGGAC CGGCCCGATC GGCCTGCTGC TCGTGCAGTT GGCCCGGCAC 
TTCGCGGGCG GCCGCGTCAT CGCCGTCGAG CCGCTGGCGC ACCGCCGCGA GGCCGCCCTC 
CGGTACGGCG CCGACCTCGC GCTCACGCCC CAGGAGGCCG CCGCGATCGA CGTCGCCGAG 
CTCGGGGCCG GAGAGCTCGG CGTGGACGTG GCGTTCGAGG TCGCCGGCAC GAACGACGCG 
ATCGAGACGT CGATGCGCCT CGTGAAGCCC GGCGCCCGCG TGGTGCTCGC TGGGATCCCG 
GACGACGACA CGTCCACGTT CACGGCGTCG ACGGCCCGCC GCAAGGGCCT GACGTTCCTG 
CTCGTGCGGC GGATGAAGGA GATGTACCCG CGCGCGATCC GCCTCGCCGA GACGGGGATC 
GTGGACGTCC GCTCGCTGGT GTCGGCGCGC ATCCCGCTCG ACGAGGCGCC GCGCGCGTTC 
GCCGAGGCGG TCGAGCGCAC CGGGCTCAAG GTCGTCATCG GCCTCGACTG A
 
Protein sequence
MRRAVLHGVG DLRLEEGPDP EVPEGFTLVR MTDVGLCGSD LHWFSEGGIG DARLTRPIVP 
GHEQAGIAQD GPYAGRLVAV DPAIPCGRCE MCLEGEVNLC PTVRFSGHGA LDGGLQELLA 
WPTDRLFPLP DGMTGADGAV LEPLGVALHA WDLAHVRAAS DVVVVGTGPI GLLLVQLARH 
FAGGRVIAVE PLAHRREAAL RYGADLALTP QEAAAIDVAE LGAGELGVDV AFEVAGTNDA 
IETSMRLVKP GARVVLAGIP DDDTSTFTAS TARRKGLTFL LVRRMKEMYP RAIRLAETGI 
VDVRSLVSAR IPLDEAPRAF AEAVERTGLK VVIGLD