| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_3226 |
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| Symbol | |
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| ID | 7857983 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | - |
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| Start bp | 3583990 |
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| End bp | 3585327 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643867327 |
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| Product | NADH dehydrogenase subunit D |
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| Protein accession | YP_002883232 |
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| Protein GI | 229821706 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0649] NADH:ubiquinone oxidoreductase 49 kD subunit 7 |
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| TIGRFAM ID | [TIGR01962] NADH dehydrogenase I, D subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00372602 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGTCCACGC AGACCTCCCC ACCCACGCCC ACCGACGACG ACGTGCCCGA GTTCACCGCC
AGCGGCGGCG ACTGGGCGCA GATCGCCGAA GAGGCGGCGC GCCTCGGCGA GGAGCGGATC
GTCGTCAACA TGGGCCCGCA GCACCCGTCG ACGCACGGCG TGCTGCGGCT CGTGCTCGAG
ATCGACGGCG AGTCCGTCGT CGAGGCCCGA GCCGGCATCG GGTACCTCCA CACGGGCATC
GAGAAGAACA TGGAGTTCCG GACCTGGACG CAGGGCGTGA CGTTCTGCAC CCGGATGGAC
TACGTGGCGC CGCTGTTCCA GGAGGCCGCG TACTGCCTCG GGGTCGAGAA GCTGCTCGGC
GTCGAGGTGC CGGAGCGGGC CACGCTCATC CGCGTGCTGC TCATGGAGCT CAACCGGATC
TCGTCGCACC TCGTGGCGAT CGCGACCGGC GGGAACGAGC TGGGCGCGAC GACGATCATG
ACGATCGGCT TCCGTGAGCG CGAGGAGATC CTGCGGATCT TCGAGCTCAT CACGGGTCTG
CGGATGAACC ACGCGTACAT CCGGCCCGGC GGCGTCGCGC AGGACATCCC GCCCGGCACC
ACCGACACCG TCCGCGACGC GTTGCCCCGC ATCGAGCGGG GCCTCGACGA GCTGGCGAAG
CTCATGCTCG CCAACCCGAT CTTCAAGGCC CGGCAGGTCG GCGTCGGCTA CCTGTCCCTC
TCGGCCGCGA TGGCGCTCGG CGTCACCGGT CCCGTGCTCC GCTCGGCGGG CCTCCCGTTC
GACCTGCGCA AGGCCCAGCC GTACTGCGGC TACGAGACGT ACGACTTCGA CGTGCCGACG
TCCACCGACT CCGACGCGTA CTCGCGGATC GTGCTCCGGC TGGACGAGGC GCGCGAGTCG
ATCAAGATCG TCCGGCAGGT GCTCGAACGC CTCGACGCGC AGGACCGGAC GGGCTCGCAC
CCGGTCATGG TCGCGGACAA GAAGATCGCG TGGCCCGCGC AGCTCGCGCT CGGCCCCGAC
GGTCAGGGGA ACTCGGCCGA GCACATCCGC ACCATCATGG GCACGTCGAT GGAGGCGCTC
ATCCATCACT TCAAGCTCGT GACGGAGGGC TTCCGCGTCC CGGCCGGGCA GGTGTTCTCG
CAGGTGGAGC ACCCGCGCGG TGTCATCGGG GTCCACCTCG TGTCCGACGG CGGCACACGG
CCGTACCGCG CACACTTCCG CGACCCGTCG TTCAACAACC TGCAGGCGCT CGCCGCGATG
TGCGAGGGCG GCCAGGTGGC CGACGTCGTC GTCGCCGTGG CCTCGCTCGA TCCGGTGCTG
GGAGGAGTCG ACCGATGA
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| Protein sequence | MSTQTSPPTP TDDDVPEFTA SGGDWAQIAE EAARLGEERI VVNMGPQHPS THGVLRLVLE
IDGESVVEAR AGIGYLHTGI EKNMEFRTWT QGVTFCTRMD YVAPLFQEAA YCLGVEKLLG
VEVPERATLI RVLLMELNRI SSHLVAIATG GNELGATTIM TIGFREREEI LRIFELITGL
RMNHAYIRPG GVAQDIPPGT TDTVRDALPR IERGLDELAK LMLANPIFKA RQVGVGYLSL
SAAMALGVTG PVLRSAGLPF DLRKAQPYCG YETYDFDVPT STDSDAYSRI VLRLDEARES
IKIVRQVLER LDAQDRTGSH PVMVADKKIA WPAQLALGPD GQGNSAEHIR TIMGTSMEAL
IHHFKLVTEG FRVPAGQVFS QVEHPRGVIG VHLVSDGGTR PYRAHFRDPS FNNLQALAAM
CEGGQVADVV VAVASLDPVL GGVDR
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