Gene Bcav_3145 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3145 
Symbol 
ID7859429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3496073 
End bp3497263 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content66% 
IMG OID643867242 
Productelongation factor Tu 
Protein accessionYP_002883151 
Protein GI229821625 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0050] GTPases - translation elongation factors 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.23221 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGAAGG CCAAGTTCGA GCGGACCAAG CCGCACGTCA ACATCGGCAC CATCGGTCAC 
GTCGACCATG GCAAGACGAC GCTGACGGCC GCCATCTCGA AGGTGCTGCA CGACAAGTAC
CCCGACCTGA ACCCCTTCAC GCCGTTCGAC GAGATCGACA AGGCGCCGGA GGAGAAGCAG
CGCGGCATCA CGATCAACAT CGCGCACGTC GAGTACCAGA CGGAGAAGCG TCACTACGCG
CACGTCGACG CGCCGGGTCA CGCCGACTAC ATCAAGAACA TGATCACGGG TGCCGCGCAG
ATGGACGGCG CGATCCTCGT GGTCGCGGCG ACCGACGGCC CGATGGCCCA GACGCGCGAG
CACGTGCTGC TCGCCCGCCA GGTCGGCGTG CCGTACCTGC TCGTCGCGCT CAACAAGTCC
GACATGGTCG ACGACGAGGA GATCCTCGAG CTCGTCGAGA TGGAGGTCCG CGAGCTGCTG
TCGTCGCAGG GCTTCGACGG CGACGACGCC CCGGTCATCC GCGTCTCGGG CCTCAAGGCC
CTCGAGGGCG ACCCGGAGTG GGTCAAGACC GTCGAGGAGC TCATGGACGC CGTGGACGAG
TCCGTCCCGG AGCCCGTGCG CGACATGGAC AAGCCGTTCC TCATGCCGAT CGAGGACGTC
TTCACGATCA CCGGTCGTGG CACGGTCGTC ACCGGCAAGG TGGAGCGCGG CAAGCTCGCG
ATCAACTCCG AGGTCGAGAT CGTCGGCATC CGCCCGGCGC AGAAGACCAC CGTCACGGGC
ATCGAGATGT TCCACAAGCA GATGGACGAG GCGTGGGCCG GCGAGAACTG TGGCCTGCTT
CTTCGCGGGA CCAAGCGTGA GGACGTCGAG CGCGGCCAGG TCGTCGTGAA GCCGGGTACG
AACACGCCGC ACACCCAGTT CGAGGCGCAG GTCTACATCC TGTCCAAGGC TGAGGGTGGG
CGTGACAACC CGTTCTACTC GAACTACCGC CCGCAGTTCT ACTTCCGCAC CACGGACGTC
ACCGGCGTCA TCACGCTGCC CGAGGGCACG CAGATGGTCA TGCCGGGCGA CAACACCGAG
ATGACGGTCG ACCTGATCCA GCCGATCGCC ATGGAAGAGG GCCTCGGGTT CGCCATCCGT
GAGGGTGGTC GCACCATCGG CTCCGGCAAG GTCACCAAGA TCCTCGCCTG A
 
Protein sequence
MAKAKFERTK PHVNIGTIGH VDHGKTTLTA AISKVLHDKY PDLNPFTPFD EIDKAPEEKQ 
RGITINIAHV EYQTEKRHYA HVDAPGHADY IKNMITGAAQ MDGAILVVAA TDGPMAQTRE
HVLLARQVGV PYLLVALNKS DMVDDEEILE LVEMEVRELL SSQGFDGDDA PVIRVSGLKA
LEGDPEWVKT VEELMDAVDE SVPEPVRDMD KPFLMPIEDV FTITGRGTVV TGKVERGKLA
INSEVEIVGI RPAQKTTVTG IEMFHKQMDE AWAGENCGLL LRGTKREDVE RGQVVVKPGT
NTPHTQFEAQ VYILSKAEGG RDNPFYSNYR PQFYFRTTDV TGVITLPEGT QMVMPGDNTE
MTVDLIQPIA MEEGLGFAIR EGGRTIGSGK VTKILA