| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_3109 |
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| Symbol | |
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| ID | 7859393 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | - |
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| Start bp | 3471836 |
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| End bp | 3472696 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 78% |
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| IMG OID | 643867206 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_002883115 |
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| Protein GI | 229821589 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGCACG TGCTGCGGGT CCGGCTCGAC CTCGCGTACG ACGGTGCGGC GTTCGCGGGG
TGGGCGCGGC AGCCCGGCCT GCGCACGGTG CAGGGCGACC TGGAGGAGGC TCTGGGCCGA
GTCCTGCGCC TCCCGGAGCC CCCGCGGCTG ACCGTGGCGG GGCGGACCGA CGCCGGCGTC
CACGCCCGCG GGCAGGTGGC CCACGTCGAC CTGCCGCGCG AGGCGTACCT GGCGGCCCCC
GGGCGGAGCG AACGCGACCC CGGCGCGGCA CTGCGGACCC GGCTCGCTGG CGTCCTGCCG
CCCGACGTCG TCGTCGGCCA CGTCGCGCCG GCCCCGCCGG GATTCGACGC CCGGTTCTCC
GCGATCTGGC GCCGGTACGC CTACCGCGTG GCCGACGACG GCGCCCTGCA CGACCCGCTG
CGGCGCGGCT GGACCGTGTG GCACCGTCGC CCGCTGGACG TCGTCGCGAT GGACGCCGCG
GCCCGGCGGC TGCTCGGTGA GCACGACTTC GCCGCGTTCT GCCGCCCTCG CGAGGGCGCG
ACGACGATCC GCACCCTCCA GGAGCTCACG TGGGTCCGCG ACGACGCCGG GCTGCTCGTG
GCGCACGTGC GGGCCGACGC GTTCTGCCAC TCGATGGTGC GCGCGCTCGT CGGTGCGTGC
CTCGCGGTCG GCGAGTCGCG GCGAGAGGTC GGGTGGCCAC GTGCGGTCCT CGACGCCGCG
CGCCGTGACA GCGCGGTGCA GGTCGCGCCC GCGCACGGGC TCGTGCTCGA GGAGATCGGC
TACCCGCCGG ACGAGGAGCT CGCGGAGCGG GCGCGGACGG CGCGCGCCGT GCGGACGCTG
CCGGACCAGC CCGCCGGCTG A
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| Protein sequence | MTHVLRVRLD LAYDGAAFAG WARQPGLRTV QGDLEEALGR VLRLPEPPRL TVAGRTDAGV
HARGQVAHVD LPREAYLAAP GRSERDPGAA LRTRLAGVLP PDVVVGHVAP APPGFDARFS
AIWRRYAYRV ADDGALHDPL RRGWTVWHRR PLDVVAMDAA ARRLLGEHDF AAFCRPREGA
TTIRTLQELT WVRDDAGLLV AHVRADAFCH SMVRALVGAC LAVGESRREV GWPRAVLDAA
RRDSAVQVAP AHGLVLEEIG YPPDEELAER ARTARAVRTL PDQPAG
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