Gene Bcav_3102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3102 
Symbol 
ID7859386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3466122 
End bp3466838 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content72% 
IMG OID643867199 
Productconserved protein DedA family 
Protein accessionYP_002883108 
Protein GI229821582 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.257043 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACATCC TCAGCACGAT CCAGGACGCC GTCATCGGCA TGGCGGAGTC CCCATGGGTG 
CTGCTCGCTC TGTTCGCGTT CTGCGTGATC GACGGGTTCT TCCCGCCGAT CCCCAGCGAG
TCGGTCGTCA TCGCGCTCGC GGCACTGGCC GTGGCGGGCG ACGGCGTCCC GATCCTCGCG
ATCATCCCCG TCGCCGCGGC CGGGGCGATG ACCGGCGACC TCATCGCCTT CTCCATCGGC
CGCCGTGTGC CGGTACGGAC GATGCGCCTG TTCTCGTCCG GGAAGGGCAA GGCGACGCTC
GCCTGGGCGG AGCGCCAGCT CGCCCGGCGT GGCGGCACGT TCATCCTCTC GGCGCGCTAC
ATCCCGGTCG GGAGGGTCGC GGTCAACATG ACGGCGGGCG CCGTCGGCTT CCCGCTGCGC
CGCTTCGTCG CCTTCGACGC CCTGGCGGCG ATCACCTGGG CGGTGTACTC CACGGTCATC
GGCCTGGCGG CAGGCCGGTT CTTCCACGAC TACCCGCTGC TGGGCGTCGT CGTCGGCATC
GTCGGCGGCG TCCTCATCGG GACGCTCGTC GACTCGATCC TGTCCCGGCG CTCCGGACGC
ACCGAGGACA AGCCCGCCGA GGGTGAGGCC CCCGAGGGTG ACGCCACTGA AGGCGGGGCC
GTGGAGGGCG ACGCCGCCCC GGTCCCGGCG ACGAGGTCCA CGGAACCCAC GGACTGA
 
Protein sequence
MDILSTIQDA VIGMAESPWV LLALFAFCVI DGFFPPIPSE SVVIALAALA VAGDGVPILA 
IIPVAAAGAM TGDLIAFSIG RRVPVRTMRL FSSGKGKATL AWAERQLARR GGTFILSARY
IPVGRVAVNM TAGAVGFPLR RFVAFDALAA ITWAVYSTVI GLAAGRFFHD YPLLGVVVGI
VGGVLIGTLV DSILSRRSGR TEDKPAEGEA PEGDATEGGA VEGDAAPVPA TRSTEPTD