| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_3101 |
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| Symbol | |
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| ID | 7859385 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | - |
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| Start bp | 3463291 |
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| End bp | 3466023 |
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| Gene Length | 2733 bp |
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| Protein Length | 910 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 643867198 |
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| Product | transcriptional regulator, SARP family |
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| Protein accession | YP_002883107 |
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| Protein GI | 229821581 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3629] DNA-binding transcriptional activator of the SARP family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.423529 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTGGGTC CGCTCGTCGT CACCCAGGAC GGCGAGGACG TCGCCCTGCC CGCCGGCCGC
AGCGTGCAGC TCGTCGCCCT CCTCGCGGTG GCAGCCCCCG ACCCGGTGTC CGCGGACCGC
CTCCTCGAAG CGCTCTGGGA CGACGGCGGC GGGACGCGGG GCGCTCTGCA GGTGCTGGTC
CACCGTGTGC GGCGCCGGCT GGGCGAGGGA GCGGTGGAGT CGGTCGGCCA GAGCTACCGG
CTCGGCGCCG CCGAGCTCGT GGCGGAGGAC TTCGCGCTGC GGGCCGGGCA CGCCCGGGAC
CGGGTCGACG TCGCCCCGAG GGAGGCGCTC GCCGAGCTCG ACGCGGCCCT GCGGCTGTGG
CGGGGTGAAC CGTTCGGCGA GCTGGCCGCG GCCTCGCCGG AGCTGGCCGC GGAGTCCGCC
CGGCTGTCGG AGCTCCACGT CGACGCCCTC GAGGCGAGGT TCGAGGCCGC GCTGACGGCG
GGGATGGCCG GGGAGCTCGT GCCGGACCTC CGGGACGCCG TCGCGGCGCA CCCGCTGCGG
GAGCGCCTCC ACGCCCACCT CATGCTCGCG CTGTACCGCG CGGGGCGCAC TGCGGCGGCC
CTCGACGCCT ACCGGGCGGC TCGCGGTGAG CTGGTCGGCG AGCTCGGCCT CGAGCCCGGG
CCGCTGCTCA AGGACCTCGA GCGGGCGATC CTGCTCGAGG ATCCCGTGCT CGCCGCGCCG
CCCGCGCCCC TCACCGGGCC GGAACGCCCG GTCCGCCCGG CGCAGCTGCC GGGTCCCGAC
CCCGCGTTCA CGGGCCGCCC CGAGGAGGTG GACCTGCTCG CCCGGGAGCT GCGGTCCGGC
TCCTCGCTCG TAGCCGTCGC CGGCCCGGGC GGTGCCGGGA AGTCGGCGCT CGCGCTGGAG
GTCGCGAACG CCGTCGCCGA CGCCTTCCCC GGCGGGCAGC TGTACGTGGA CCTGCGTGGG
GCGATGCCGG ACGGCGAGCC GCGCGGGGTG GAGGAGGTGC TGGAACGCTT CCTGCGCGCG
CTCGGCCTGC CGCGCGCGCC GTCGGACCCG GAGGAGGCGG CGGCGGAGCT CCGCACGCGC
ACGGCGCTCA GCCCGGTGCT GGTGGTGCTG GACGACGCCG CGTCGCTGGC CCAGGTGCGC
CCCCTGCTCC CGAGCGCACC GTCGGCGGCG ATCGTCACGT CACGCCCGGT CCTCGGCCTG
CCCATCTCCC TGCTCGTGCA CCTCGACGAG CTGTCGGACG TCGAGGCCCT CGAGATGCTC
GCTCGCGCGG CAGGCGAGGA CCGGGTGCGG GCGGAGGAGG CGGCGGCGCG ACGGATCGTC
GACGCCTGCG GGCGACTTCC GCTCGCGCTG CGGATCGCCG GCGCACGCCT GGCCGCGGCG
CCGCACCGCC GGCTCGCGGT GCTCGCGGAC CGCCTCGGCG ACGAGCGCCA CCGGCTCGAC
GAGCTGCGCC ATGGCGACCT CGCCGTCCGG GCGAGCATCG CCGTCGGTCT GCGCGGGCTC
GACCCCCTCG CTCCGCGGAT GCTCGCGGCG CTCGGCGTCC TCGACATGCC GTCGGTGAGC
CCGGTCGCCG CCGCGCGGCT CGCCGACGTC CCGCTGGCCG TGGCCCGCCG GCGCCTCGAC
GACCTCGCCG AGGCGCGGCT GCTCGTGACC GGTGCCGACG AGTCGGTGAC GATGCACGAG
CTCGTGCGCT TCTTCGCGTC CGAGCGTGCC GGCGTGGAGT TCGACGACGA CGAGCGGGCG
GCGCTCGTGC GCCGCGGGTA CGAGCACTAC CTGGCGTCCG TGCGTGCCGC GAGCCACGCA
TTCACGCCGG ACCTGCCGGA CTTCCGGATG CGTGTCGGCC CCTCGGTCGA GCCGCGCGCC
GTGCTGGCCG TCGAGTTCGC CGACGCGCAG GCCGCACTCG CGTGGGTCCG GACCGAGATC
GCGAACCTCC AGGCGGTCGT CGACGGCGTC GCGCGCCTGC CCGACGGCCC GGAGCTCGTG
GCGGCGATGC TCGCACCCCT CGTCCGGATC TTCGACGCTC AGGCGCTGCA CGGGCCGGCG
GCACGCATGT ACGCGCCCGT CCTCGAGCGG GACGCGCCGA CGTCGCCCGC CGAGGCGCTG
GTGTGGGCGG ACTCGGTGGT CGTGCGGCAG CACGACCCCG CGAACGACGA CCGCCTCGAC
GCGGCGTTGG AGGTGCTGCG CTCCGGCGGT GACGCCAGGG CGCTGGCGAC CGCGCTCAAC
GTCCGGGGGA TCCGCGGCAA CCGCACCGGC AGGTTCGACC GTGCGGCCGA GGCGTTCGCG
GAGAGCATCG AGATCCTGAC CACGGCGGGG CACGACACGG CGGCGGCCTA TCCGCGCACC
AACCTCGTCG ACGCGCTGAC CGGCCTCGGG AGGCTCGACG AGGCGGCGGC GGTGGCCGAG
GCGAACATCG CCTCGTCCAC CGGGATGCCC CGCGCCATCA CGAGGTGCAA CCTCGCGATG
CTGCGCGCGG GCAGCGGACG CCTCGACGAG GCGCACGAGC AGTTCCGCGA GGCCGCGCGG
GAGCTGCGGG ACTCCGGCGA CCTGCACATG ACGGCGCGGT GCCTGTGGCA CGACGCCGCG
GTGCTCGGCG ACGCCGGGCG CACCGAGGAG GCACGTCAGA CGCGCGCCGA GGCGGTCGGC
CTCGCCGTCG AGCTGGGCCT GCTGACACCG GCCGCCGGCG AGTCCGCCCT GGCCGATCCG
TCGGGGGCCG AGGACGCCTT CGGGATGAGC TGA
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| Protein sequence | MLGPLVVTQD GEDVALPAGR SVQLVALLAV AAPDPVSADR LLEALWDDGG GTRGALQVLV
HRVRRRLGEG AVESVGQSYR LGAAELVAED FALRAGHARD RVDVAPREAL AELDAALRLW
RGEPFGELAA ASPELAAESA RLSELHVDAL EARFEAALTA GMAGELVPDL RDAVAAHPLR
ERLHAHLMLA LYRAGRTAAA LDAYRAARGE LVGELGLEPG PLLKDLERAI LLEDPVLAAP
PAPLTGPERP VRPAQLPGPD PAFTGRPEEV DLLARELRSG SSLVAVAGPG GAGKSALALE
VANAVADAFP GGQLYVDLRG AMPDGEPRGV EEVLERFLRA LGLPRAPSDP EEAAAELRTR
TALSPVLVVL DDAASLAQVR PLLPSAPSAA IVTSRPVLGL PISLLVHLDE LSDVEALEML
ARAAGEDRVR AEEAAARRIV DACGRLPLAL RIAGARLAAA PHRRLAVLAD RLGDERHRLD
ELRHGDLAVR ASIAVGLRGL DPLAPRMLAA LGVLDMPSVS PVAAARLADV PLAVARRRLD
DLAEARLLVT GADESVTMHE LVRFFASERA GVEFDDDERA ALVRRGYEHY LASVRAASHA
FTPDLPDFRM RVGPSVEPRA VLAVEFADAQ AALAWVRTEI ANLQAVVDGV ARLPDGPELV
AAMLAPLVRI FDAQALHGPA ARMYAPVLER DAPTSPAEAL VWADSVVVRQ HDPANDDRLD
AALEVLRSGG DARALATALN VRGIRGNRTG RFDRAAEAFA ESIEILTTAG HDTAAAYPRT
NLVDALTGLG RLDEAAAVAE ANIASSTGMP RAITRCNLAM LRAGSGRLDE AHEQFREAAR
ELRDSGDLHM TARCLWHDAA VLGDAGRTEE ARQTRAEAVG LAVELGLLTP AAGESALADP
SGAEDAFGMS
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