Gene Bcav_3078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3078 
Symbol 
ID7858538 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3431837 
End bp3433477 
Gene Length1641 bp 
Protein Length546 aa 
Translation table11 
GC content68% 
IMG OID643867175 
ProductFructose-bisphosphate aldolase 
Protein accessionYP_002883084 
Protein GI229821558 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.295752 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.807756 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCGGC AGGACACGAT CGACCTCACC GGACCCATCG ACGTCGAGCC CCCGCTCGGC 
GAACGAGGCA CCGGGGAGTC GCACGCGCGG CGTTGGACCG GGGGGTGGGG GTTCGTCGCG
AAGCTCACCC TCATGGCCCT GGTCAACGCG GCGGGGGTCG CGCTCGGCTG GTCGGCGTAC
GTCGAGGGGT CGTGGGGCAT CCTGCTCGGC GCCGTCGCGA TCCTCGTCGT CACGAACTGG
GTGTACTTCA GCCGGCGCGC GCTGCCGCTG AAGTACCTCC TCCCGGGCCT GCTGTTCCTG
CTCGTCTTCC AGCTCTTCAC GATCGTGTAC ACGGGCGTCG TCGCGTTCAC CAACTACGGC
ACGGGGCACA ACAGCACTCA GGAGCAGGCC GTCGACGCCG CGCTGATCCA GAGCGAGCGG
CGGGTCGAGG GGTCCGAGAC CTACCCCCTC ACGGTCGTCG AACGGCTCGG CACCGTGGGC
TTCGCGATCG TCGACGGAGA CGAGGTCCGG GTCGGGACGG CGGAGAGCCC GTTGGCGGCA
GCACCGGACG CGAGCGTCGA CGACGCAGGC CGGGCCTCCG ACGTGCCGGG CTGGGACGTG
GTCGCCTACC AGCGGCTCCT CGAGGACCAG GCGCTCCAGG AGGAGGTGCT CGAGCTCCGG
GTGCCGGTCT CGGACGACGC GGAGGACGGG TCGATCCGGA CCCGCGAGGG GACGACGGGG
GCGATCTACC TCTCCACGCT CGAGTGGGAC CCCGACGCCC AGACGATGAC GGACACGGCG
ACGGGCGTCG TGTACCGGGC GAACGACGAC GGTCAGTTCT CCTCGGACGA CGGCGAGACG
CTCCCCGTCG GGTGGCGCGT CGGGGTCGGG TTCGAGAACT TCACGCGAGC CATCACCGAC
ACCGACTACT CGGGTCCGCT GCTGCGGATC ACGGCATGGA CGTTCTCGTT CGCGATCCTC
ACCGTGGCGA CGAGCTTCCT CGTCGGGCTC GTGCTCGCCC TCGTGTTCAA CGACGCGCGC
GTGCGAGGGC GGAACGTGCT GAGGACGCTG TTCATCCTGC CGTACGCGTT CCCGGCGTTC
CTCTCGGCGC TCCTGTGGCA AGGCATGCTC AACCCGAACG CGGACTACGG GCTCATCAAC
GACTGGTTCT TCTTCGGCGC CTACATCCCC TGGTTGACCG ACCCCTGGCT CGCGAAGCTC
TCCATCATCC TCGTAAACCT GTGGCTGAGC TTTCCGTACT GGTTCCTGAT CTGTACCGGG
GCGCTGCAGT CGCTCCCCGA CGACGTGCTC GAGGCGGCAA AGATCGACGG GGCCGGGACG
TGGCGGACGT GGCGGACCAT CATCATGCCG TTGCTGCTCA TCTCGACGAC CCCGCTGCTG
ATCGCGTCGT TCGCCTTCAA CTTCAACAAC TTCGCGATCA TCTACCTGCT GACCGGGGGC
GGGCCGCGGT TCCCCGACAC GTCAGCGCCT CTCGGGCACA CCGACATCCT CATCTCGATG
ATCTACCAGA TCTCCGGCGT CGCCGGCGGG CGAGCTGACT ACGGGCTCGC GAGCGCCCTG
TCGATCATCG TCTTCGTCAT CATCGGCACG ATCTCCGGGT TGGCCTTCCG GCGCACCCGC
AGGCTCGAGG AGGTGCTCTG A
 
Protein sequence
MSRQDTIDLT GPIDVEPPLG ERGTGESHAR RWTGGWGFVA KLTLMALVNA AGVALGWSAY 
VEGSWGILLG AVAILVVTNW VYFSRRALPL KYLLPGLLFL LVFQLFTIVY TGVVAFTNYG
TGHNSTQEQA VDAALIQSER RVEGSETYPL TVVERLGTVG FAIVDGDEVR VGTAESPLAA
APDASVDDAG RASDVPGWDV VAYQRLLEDQ ALQEEVLELR VPVSDDAEDG SIRTREGTTG
AIYLSTLEWD PDAQTMTDTA TGVVYRANDD GQFSSDDGET LPVGWRVGVG FENFTRAITD
TDYSGPLLRI TAWTFSFAIL TVATSFLVGL VLALVFNDAR VRGRNVLRTL FILPYAFPAF
LSALLWQGML NPNADYGLIN DWFFFGAYIP WLTDPWLAKL SIILVNLWLS FPYWFLICTG
ALQSLPDDVL EAAKIDGAGT WRTWRTIIMP LLLISTTPLL IASFAFNFNN FAIIYLLTGG
GPRFPDTSAP LGHTDILISM IYQISGVAGG RADYGLASAL SIIVFVIIGT ISGLAFRRTR
RLEEVL