Gene Bcav_3046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3046 
Symbol 
ID7858506 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3397846 
End bp3398574 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content75% 
IMG OID643867143 
Producthypothetical protein 
Protein accessionYP_002883052 
Protein GI229821526 
COG category[S] Function unknown 
COG ID[COG3346] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0127879 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGCGC TCCTCGCGCT GTTCCTCGTG GCCGCCCTGG TGTGCGGACG GCTCGGCGCG 
TGGCAGCTCG ACCGGGCGCG GCAGTCCGCC GAGATGGCGC AGGAGATCGC CGACGCCGCC
GAGGCGAACG CGGCGCCCGT CCCGCTGGAC GACGTCACCC GGCCGGGTGA GCCGGTGCTG
GCCACGATGA TCGGGGTGCG GGTCGACGTC ACCGGGACGT TCGACGCCGC TGAGCAGCTG
TTCGTCCCGG GCGTCGAGCG CGACGGTCGT TCCGGGTACC TGGTGCTGGC TCCGCTCGTG
GTGGAGTCCT CGGACGCGCT GGTCACCGTG GTGCGTGGCT GGGTGGCCTC GCCCGAGGAC
GCCGGGCAGC TCCCCGAGGG CGAGGTGTCG ATCGTCGGGC AGCTCGGTTC GGGCGAGGCG
TACGAACCGG GGGAGCGGGG GGACGGCGAG GTGCTGTCGG TCAGCCCGGC TCAGCTGGCG
AACACGTGGG GCGTGCCGAT GTACGGGATG TACGTCGTGG CGCAGGAGAC GTCCCCGGCG
CCGGCCGCCG CGGTCCTGGT GGGGCCGCCG CCCCCGCCCG CCGAGGGTGG TGGCGGGCTG
AACTGGCGCA ACATCGCCTA CGCCGCCGAG TGGTGGGTGT TCGGTGGCTT CGCCGTGCTG
CTGTGGGTGC GGCTCGTGCG CGACGAGGTG CGGCACCGGC GCGAGGACGA CGGCGCCGCC
CTCGCGTGA
 
Protein sequence
MLALLALFLV AALVCGRLGA WQLDRARQSA EMAQEIADAA EANAAPVPLD DVTRPGEPVL 
ATMIGVRVDV TGTFDAAEQL FVPGVERDGR SGYLVLAPLV VESSDALVTV VRGWVASPED
AGQLPEGEVS IVGQLGSGEA YEPGERGDGE VLSVSPAQLA NTWGVPMYGM YVVAQETSPA
PAAAVLVGPP PPPAEGGGGL NWRNIAYAAE WWVFGGFAVL LWVRLVRDEV RHRREDDGAA
LA