Gene Bcav_3034 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3034 
Symbol 
ID7858494 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3382885 
End bp3384186 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content76% 
IMG OID643867131 
Productputative signal transduction histidine kinase 
Protein accessionYP_002883040 
Protein GI229821514 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.494184 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00256181 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCGAGG CCCGACTCCC GCTGCGCCGT CCCGATGAGG GCCGGTGGAT CGGTGGTGTC 
GCCCGCGGGC TCTCCGTGCA CCTGCGGATC CGCGTGGACC TCGTCCGGTG GGCGTTCGTG
GCGCTCGGCC TGCTCGGGGG TGCGGGCCTC GTGCTGTACG TCTTCTGGTG GGTCACGATC
CCGCCCGGGA ACCCTGCCGA CGCGCTCGCG CGGGAACGGC CGAGCACGTG GACCCGCCTC
GTGCGCCCAC CGCAGGACCC GGACGCCGCC GCCGTGCCGC CGCGCCGGAT CCGCGTGGCC
GACATCGGGA TCGCGCTGGG GCTGCTGGCG GTCGCGGTGG TCGTCCTGGC GCAGCGCTCC
GGCATGAGCA CGGAGACCCG CTGGTACGTG CCGGTCCTCC TGCTGCTGGC CGGTACCGCG
TTGGCGTGGA GCCAGCTCGA CGCGCGGCGC TCGGGGGCGG ACAGCCCGCG GGTCAGCCGG
CTGCGCCTCG TCGGCGGTCT CGTCATCGCA GCCGCGGGGG TCCTGCTCCT CGTCGGCCAG
GAGGCCGACC CGGCGCTGCT GCTGCAGTCG GCCGTGGCCG CGCTCGCCGT CCTCGCGGGT
GTCGCGCTCG TGCTCGCACC GTGGTGGCTC CGGCTGGTCC GCGAGCTCGG CGACGAACGC
GCCGCGCGGG CGCGCGAGTC GGAGCGCGCC GACATCGCCG CCCACCTGCA CGACTCCGTG
CTCCAGACGC TCGCCCTCAT CCGCGCCCGG GCGACGGACG CGGACGTCGC GCGGCTCGCG
CGGGCCCAGG AGCGCGAGCT GCGGACGTGG CTCTACGACG ACCGCTCGGC CCCCGGCACG
TCGCTCGCCG CGGAGGTGGC GGACGTCGTC GCGCACGTCG AGGACACCCG GTCCGCGCCC
GACGGGAGCG CCGTCGCCGT CGAGACCGTC GTTGTCGGCG ACTGCATCCC GGACGAGACG
ACCCACGCCC TGCTGCTCGC GACGCGCGAG GCGCTCGTGA ACGCCGTCGC GCACGGCCGC
CCGCCCGTGT CGCTCTATGT CGAGGTGGGC GCGCAGGACG TCGAGGTGTT CGTCCGTGAC
CGCGGTGACG GCTTCGATCT CGACGCCGTC CCGTCCGACC GGTTCGGGGT GCGGGAGTCG
ATCATCGGCC GGGTGCGACG GCGTGGTGGC GACGCGTCCG TACGATCGTC GGACGCCGGC
ACGGAGGTGC GTCTTCGCGT CCCGGCGCCG GCGCGGGACG GGAGCGCCGG ACCCGCGGCG
ACGACCGCCA CGGCCGCAGG CCGCCAGGAG GAGGAGACAT GA
 
Protein sequence
MTEARLPLRR PDEGRWIGGV ARGLSVHLRI RVDLVRWAFV ALGLLGGAGL VLYVFWWVTI 
PPGNPADALA RERPSTWTRL VRPPQDPDAA AVPPRRIRVA DIGIALGLLA VAVVVLAQRS
GMSTETRWYV PVLLLLAGTA LAWSQLDARR SGADSPRVSR LRLVGGLVIA AAGVLLLVGQ
EADPALLLQS AVAALAVLAG VALVLAPWWL RLVRELGDER AARARESERA DIAAHLHDSV
LQTLALIRAR ATDADVARLA RAQERELRTW LYDDRSAPGT SLAAEVADVV AHVEDTRSAP
DGSAVAVETV VVGDCIPDET THALLLATRE ALVNAVAHGR PPVSLYVEVG AQDVEVFVRD
RGDGFDLDAV PSDRFGVRES IIGRVRRRGG DASVRSSDAG TEVRLRVPAP ARDGSAGPAA
TTATAAGRQE EET