Gene Bcav_2975 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2975 
Symbol 
ID7860086 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3317464 
End bp3318396 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content71% 
IMG OID643867073 
Productdihydrodipicolinate synthetase 
Protein accessionYP_002882982 
Protein GI229821456 
COG category[E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.696514 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGCCGG TTCTCAGCCT GCCACTGGAC GAGGAGTGGC AGATCGACTC GCTCGCCTTG 
CGCCGCGAGA TCGACTGGCT GCTCGAGCTC GGGTGCGACG GCGTCGTCAT CGGCATGGTG
TCGGAGATCT TGCGCCTCGA TCTCGCCGAG CGGGAGCGGT TCGCCGAGCT CGTCGTGTCG
GAGGTCGGCG GGCGCGGCGC CACGGTGATC GCCGTGAGCG CGGAGTCGAC CCCGGGCGCG
ACCAGGCTTG CCACCCACGC TGCGCGCATC GGCGCGACCG CCGTGATGGC GAACGCTCCC
ATCACGAGCC TCGCCGATCC CGCGTCGCTG GAGTCGCACT TCGTGGCGAT CGCCGAGGCG
AGCGGCGCGT TGCCCGTCGT CGTGCAGGAC GCTTCAGGCT ACGTCGGGCG GCCGCTGTCG
ATGCGGCTCA TGCTCCGGCT GCTGGACGAG TTCGGGCCCG ACAAGGCGCA GTTCAAGCCC
GAGGCGATCC CGCTGGGACC GCGCGTCAGC GAGCTGATCG AGACCAGCGG GGGCCGCGCC
CGGGTGTTCG AAGGCAGCGG GGGGCTCGCG CTGGTGGAGA GCGCGCGTCG TGGCGCGGTC
GGCACCATGC CCGGATCCGA CGTCGCATGG GCGATCGTTG CGATGTGGAG AGCACTGCGG
GCAGGCGACC TGGTGCGCGC GGACGAGGTA GGTGCCGGGG TGGCGGCGCT GCTCTCGCAC
GTCTCCGCTC TCGACCGCTA CATCGCCGTC GAGAAGCATC TGCTGGTTGA GCAGGGGGTG
TTCACCTCAG CCCGTCGGTT CGGCCCCGGG ATGGCCGGGC TGGACCCGAT CACGAAGGAG
GAGACGGTGC GACTGATGCA GAGACTGCAG CGGATCGTCG GCCGTACTGA CCAATGGAAG
CCAGCAGCCG ACGTGGAGGG CGTGCACCGA TGA
 
Protein sequence
MLPVLSLPLD EEWQIDSLAL RREIDWLLEL GCDGVVIGMV SEILRLDLAE RERFAELVVS 
EVGGRGATVI AVSAESTPGA TRLATHAARI GATAVMANAP ITSLADPASL ESHFVAIAEA
SGALPVVVQD ASGYVGRPLS MRLMLRLLDE FGPDKAQFKP EAIPLGPRVS ELIETSGGRA
RVFEGSGGLA LVESARRGAV GTMPGSDVAW AIVAMWRALR AGDLVRADEV GAGVAALLSH
VSALDRYIAV EKHLLVEQGV FTSARRFGPG MAGLDPITKE ETVRLMQRLQ RIVGRTDQWK
PAADVEGVHR