Gene Bcav_2948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2948 
Symbol 
ID7861367 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3289708 
End bp3290955 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content75% 
IMG OID643867046 
Productamidohydrolase 
Protein accessionYP_002882955 
Protein GI229821429 
COG category[R] General function prediction only 
COG ID[COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase 
TIGRFAM ID[TIGR01891] amidohydrolase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000413179 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGTCCACCC CCGTCCTGAC AGGTCCCCTC GCCGCGCTCG CCGCGCGCAT CGACGACGTC 
GTCGCCGACC TCACCGACGA GCTCGTCGCG ATCCGGCGCG ACATCCATGC GCATCCGGAG
CTCGCCCGCA CGGAGCAGCG CACCACCGCC GCCGTCGCCG AGCGGCTGCG CGCCGCCGGG
CTGAGCCCGC GACTGCTGCA CGGCTCGGGA CTCGTGTGCG ACGTCGGCCC GAGCGCCGCG
AGCACCGGCC GCCGCCTCGT CGGGCTGCGT GCCGACCTCG ACGCGCTGCC GGTGCCGGAG
ACCACGGGGC TGCCGTTCGC GTCGACGAAC GCCGGTGTGG CGCACGCGTG CGGGCACGAC
GTGCACACGA GCGTCGTGCT CGGCGCGGGC CTGGCGCTCG CCGAGCTCGC CGCGTCCGGC
GACCTCGCCG TCGGCGTCCG CCTCGTGTTC CAGCCGGCCG AGGAGGTCAT GCCCGGCGGC
GCTCTCGACG TCATCGAGGC CGGCGTGCTC GAGGGTGTCG AGCAGGTCTA CGCGCTGCAC
TGCGACCCGA AGGTCGACGT CGGCGCGATC GGGTCCCGCA TCGGCTCCAT CACGTCGGCG
TCGGACACGA TCACCGTGAC GCTGACGTCG GCCGGAGGTC ACACGTCGCG CCCGCACCTG
ACCGGCGACG TCGTCTTCGC CCTCGGCCAG GTGATCACGC AGGCGCCGTC GGTGCTCGGG
CGGCGGCTGG ACCCGCGCGC CGGCGCCAAC CTCACGTGGG GGAGCGTGCG CGCGGGGCAG
GCGGCGAACG CGATCCCGAG CGTCGGAACC CTCCGCGGGA CGCTGCGCAT GCTCGACGCC
GGCGCGTGGG AGCACGCGGG TGCGGTGCTC GACGACGCGA TCGAGCAGAT CGTGGCGCCG
TACGGCGTCG GGGTCGAGGT CACGCACGTG CGCGGCGTGC CCCCGGTCGT CAACGAGGAA
CGCGCCGTGG CGATCATCGA GCACGCCGCG CGGACGGCGC TCGGCGAGGA GGGCGTGCTG
CTCACCGAGC AGTCGCTCGG CGGGGAGGAC TTCGCCTGGT ACCTGCGCCG CGTCCCGGGC
GCCATGGTGC GGCTGGGGAC CCGGACGCCG GGCGGGCCGA CCTATGACAT CCACCGCGGC
GACCTCGTCG TGGACGAGCG CGCCATCGGC GTCGGGGCGA GAATCCTTGC GCGGACGGCG
ATCATCGCCG GGTCGCGTCC GGCGCCGGAG CGTCTCCCGG TCGCCTGA
 
Protein sequence
MSTPVLTGPL AALAARIDDV VADLTDELVA IRRDIHAHPE LARTEQRTTA AVAERLRAAG 
LSPRLLHGSG LVCDVGPSAA STGRRLVGLR ADLDALPVPE TTGLPFASTN AGVAHACGHD
VHTSVVLGAG LALAELAASG DLAVGVRLVF QPAEEVMPGG ALDVIEAGVL EGVEQVYALH
CDPKVDVGAI GSRIGSITSA SDTITVTLTS AGGHTSRPHL TGDVVFALGQ VITQAPSVLG
RRLDPRAGAN LTWGSVRAGQ AANAIPSVGT LRGTLRMLDA GAWEHAGAVL DDAIEQIVAP
YGVGVEVTHV RGVPPVVNEE RAVAIIEHAA RTALGEEGVL LTEQSLGGED FAWYLRRVPG
AMVRLGTRTP GGPTYDIHRG DLVVDERAIG VGARILARTA IIAGSRPAPE RLPVA