| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_2929 |
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| Symbol | |
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| ID | 7861348 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | - |
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| Start bp | 3268964 |
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| End bp | 3270148 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 643867027 |
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| Product | succinyl-diaminopimelate desuccinylase |
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| Protein accession | YP_002882936 |
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| Protein GI | 229821410 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01900] succinyl-diaminopimelate desuccinylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000511731 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGCCCGGCG TCGTTAGGCT CGGGATCGTG ACAGCCACAC CGCTCGACGA CGCACCCGCC
CCGAGCCCCG TGCTCCCCGA CCTCAGCACC GTCGACGTCG TCGACCTCAC ACGGATCATC
TGCGACATCC CCTCCGTCAG CGGCGACGAG ACGGCCCTCG CCGACGCCAT CGAGGCGGCG
CTGTCCCGGT ACGACCACCT CGAGGTGCTC CGGGACGGCG ACGCCGTCGT CGCGCGGACG
CACCTGGGGC GCGCGGAGCG CGTCGTCATC GCCGGGCACA TCGACACGGT CCCGGTGCAG
GGCAACCTGC CGGTGCAGGT GCGCCCCGGG GAGGGGAGCG ACGCCGGCGA CGACGTCCTG
TGGGGGCGCG GCACCGTCGA CATGCTCGGC GGCGTCGCCG TGCAGCTCCA CCTCGCCGCG
CGGCTGACCG CGCCGACGCG CGACGTCACG TGGGTCTTCT ACGACCACGA GGAGGTCGCC
TCCGACCTCA ACGGGCTCGG CCGCATCGTG CGCACGCACC CGGACTGGGT GCGCGGCGAC
GTCGCGATCC TGTGCGAACC GACCCGGGGC GACGTCGAGG GCGGGTGCAA CGGCACGCTG
CGGCTCGACG TCACCCTGCG GGGCCGCACC GCCCACTCCG CGCGGGCCTG GATGGGGCAC
AACGCGGTGC ACGACGCGTG GCGGGTGCTC GAGCGGCTCG CCGTGCACAC GCCGGCCGAG
GTGGAGGTCG ACGGCCTGCG CTACCGCGAG AGTCTCAACG CCGTCGCGAT CCGCGGCGGG
ATCGCCGGCA ACATGATCCC GGACACCTGC GTCGTCGAGA TCAACTACCG GTTCGCGCCG
TCGCGCAGCG TGGACGACGC CGTCGCGTAC GTCCTGGACG TCCTGGCCGG CATCGAGGGG
CTCGAGACCG AGCTCACCGA TGCCGCGGCG GGAGCCAGGC CGGGCCTCGA CCACCCGGCG
GCGCAGGAGT TCCTCGCTGC CGTGCGCGAG GTGACGGGGG CGCAGGTCAT GCCGAAGTAC
GGCTGGACCG ACGTCGCACG GTTCACCGAG CTCGGCGTGC CGGCCGTCAA CTTCGGGCCG
GGGGATCCGC TCCTGGCGCA CGCCGACGAC GAACGGTGCC CGGCCCGCCA GATCAGGTCG
GTCGCCGCCG CCCTCGAGGC CTGGCTCGAC GGGGAGTCCG CATGA
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| Protein sequence | MPGVVRLGIV TATPLDDAPA PSPVLPDLST VDVVDLTRII CDIPSVSGDE TALADAIEAA
LSRYDHLEVL RDGDAVVART HLGRAERVVI AGHIDTVPVQ GNLPVQVRPG EGSDAGDDVL
WGRGTVDMLG GVAVQLHLAA RLTAPTRDVT WVFYDHEEVA SDLNGLGRIV RTHPDWVRGD
VAILCEPTRG DVEGGCNGTL RLDVTLRGRT AHSARAWMGH NAVHDAWRVL ERLAVHTPAE
VEVDGLRYRE SLNAVAIRGG IAGNMIPDTC VVEINYRFAP SRSVDDAVAY VLDVLAGIEG
LETELTDAAA GARPGLDHPA AQEFLAAVRE VTGAQVMPKY GWTDVARFTE LGVPAVNFGP
GDPLLAHADD ERCPARQIRS VAAALEAWLD GESA
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