Gene Bcav_2911 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2911 
Symbol 
ID7861330 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3252814 
End bp3254298 
Gene Length1485 bp 
Protein Length494 aa 
Translation table11 
GC content74% 
IMG OID643867009 
Producthypothetical protein 
Protein accessionYP_002882918 
Protein GI229821392 
COG category[S] Function unknown 
COG ID[COG3463] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.449052 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0308568 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGCG GCGGGCGGGG GGCGACGACG ACGGCCGACG ACGCGGCGGG CGAGCCGGAC 
GCGACGGACG CCGTCGTCGC CCAGGCACCC GCGCACACCG GCCGGGCGAC GTGGGTCGCA
CCGAGCGCCG TCGGCCTCGG CGTCACCGCG GTGTACTGGC TGTACGCCGC CCGTCAGTGG
GCGAACTACG ACGTGCCGTC CTGGGACCTG GGGATCTTCA CCCAGACGGT GCAGGCGTAC
GCGGAGCTGC GCGTCCCGAT CGTCCCCATC AAGGGCGACG GCTTCATGAT CCTCGGGGAC
CACTTCCACC CCCTGCTCGT GGTGCTCGCC CCGTTCTACG CCGTGTTTCC CTCCGGGCTC
ACGCTGCTGC TCGCGCAGGC CGTCCTGTTC GGGCTCACCG CCGGCATCAT CACGCGCCTG
GCCGTGCGGC GGCTCGGCAC GTGGCCCGGC GTCGGGATCG GCATCGCCGC CGGGCTGTGC
TGGGCGCTCG CCTCAGCGGC CTACTCCCAG TTCCACGAGA TCGCTCTCGC CCTCCCCCTG
CTCGCCCTGT CGCTCGCAGC CCTCACGGAG GGGAGGCTGC GCCTGGCCGT CGCGTGGGCC
GTCCCGATCG TCCTCGTCAA GGAGGACCTC GGGCTCACGC TGGCCGCGAT CGGGTTCGTC
GTCGCCCTGC GTGCCTCGAC GCGCTCGGAG CGCCGGCTCG GGTGGGCCAC TCTCGCGGGT
GGCCTCGCAG CGTTCTTCGT GACGACGCTG CTCGTGCTCC CGGCGCTCAA CCCGAGCGGC
GTGTGGCCGT ACGCGCAGGA CTCGATCGCC GCGGCGTTCC TCGCCGACCC CGGCGCCGCC
CTCGCGAGCC TCGGGACCGG GGCGCCCGAG AAGCTCCTCA TGGTGCTGGC GCCGTTCGCG
GTGACGGGCT TCGTCGCGCT CCGCTCCCCG ATCGCCCTCG TCGCCGTCCC CACGCTCGCC
TGGCGGCTGA CGTCCGACGT GCCGTACCAC TGGGGCGTGC GCTGGCACTA CAGCGCGATC
CTCGTGCCCA TCGTCTTCTG CGCGCTCGTC GACGCGCTGC CCGCGATCCG GGAACAGGTG
CGTCCGGCGT GGCGCGAGCA CGTCGTGCCG GTGGTGAGCG GGGTGGTGGC GGTCGTCGCC
CTCGCCCTGC TCCCGTTCTT CCCGCTGTGG ACGCTCACGG ATGCGGCGAC GTACGCGCCC
AGCGAGCGCG CCGCCGCGGC GCGGCGCATC GAGGCGCAGA TCCCCGACGG CGCCCTCGTC
GAGACCGATA TCACCCTCAT GGCGTACCTC GCGCCACGCA CCACCGTGTA CTGGGTGGGC
AACGAGAACC CGACGCCGGA CCTCCTCCCG ATCGACACCC GGTCCGGCGT CCTGCACCCG
CCACCGACCG ACATCGTCGT GTACGCGCAG GGGCAGCACC CCGGGATCGC GTGGATCGAG
ATCGCCGACG ACGGCGGCTT CCTCCTCGCG CGGCGCGCGG AGTAG
 
Protein sequence
MTSGGRGATT TADDAAGEPD ATDAVVAQAP AHTGRATWVA PSAVGLGVTA VYWLYAARQW 
ANYDVPSWDL GIFTQTVQAY AELRVPIVPI KGDGFMILGD HFHPLLVVLA PFYAVFPSGL
TLLLAQAVLF GLTAGIITRL AVRRLGTWPG VGIGIAAGLC WALASAAYSQ FHEIALALPL
LALSLAALTE GRLRLAVAWA VPIVLVKEDL GLTLAAIGFV VALRASTRSE RRLGWATLAG
GLAAFFVTTL LVLPALNPSG VWPYAQDSIA AAFLADPGAA LASLGTGAPE KLLMVLAPFA
VTGFVALRSP IALVAVPTLA WRLTSDVPYH WGVRWHYSAI LVPIVFCALV DALPAIREQV
RPAWREHVVP VVSGVVAVVA LALLPFFPLW TLTDAATYAP SERAAAARRI EAQIPDGALV
ETDITLMAYL APRTTVYWVG NENPTPDLLP IDTRSGVLHP PPTDIVVYAQ GQHPGIAWIE
IADDGGFLLA RRAE