| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_2889 |
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| Symbol | |
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| ID | 7860421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | - |
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| Start bp | 3224374 |
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| End bp | 3225495 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 643866987 |
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| Product | PDZ domain-containing protein |
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| Protein accession | YP_002882896 |
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| Protein GI | 229821370 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3480] Predicted secreted protein containing a PDZ domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00716202 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCAGAGA ATGGGCGGGT GGTCACGCGC ACGTACCGGA ACATCCCCAT GCCGCGATCG
TCGCTCTCGC CGCGCAGCGT GCTGCTCGCG GCCAGCGGTC TCGCGACGTT CGTCCTGCTC
GCCGCGATCC TCGTCGTGCC GGCGCCGTAC GCGATCGAGC AGCCCGGGCC GACCGTCGAC
ACGCTCGGGG AGGTCGACGA CGTCGAGCTC ATCACGATCC CGGACGCCGA GACGTTCCCC
AGCGAGGGGC AGCTGCGCCT GACGACCGTG TCGGTCGCCG GAGGCCCGGG CTTCCCGGTC
GATGCGGCGG ATGTCGTGCA GGGCTGGCTG TCCTCCGCCG TCGCCGTCGT CCCGGTCGAG
AGCGTCTACC AGCGCGGCGT GAGCCGTGAG GAGCTGCAGT CCACGTCGCA GGCGCAGATG
ACGACGTCGC AGGAGAACGC GACGGCTGCC GCCCTCACCG AGCTGGGCTA CGAGGTGCCG
ACGGTGCTGA CCGTGAGCGC GGCGGTCCCG GACTCCGGGT CGGACGGCGT CGTCGAGCCG
GGCGACGTCG TCACGTCGAT CCAGGCGCCG GACGGCCCGC TCGTGCCGAC GGAGACGTTC
CCGGACCTCA CGCAGGTGCT CGACGGCGTC GCCCCCGGTT CCAGCGTCGC GCTCGGCGTC
GAGCGCGACG GCGAGCCCGA GACCCTCGAC GTCGTGACCG GCGACGACGG CAACGGCGGC
AGCGTGCTCG GCGTGCTCAT CGACCCGACG TTCACGTTCC CGATCGAGGT CGACATCGAG
ATCCAGGACA TCGGCGGGCC GAGTGCGGGC ACGATGTTCG CGCTCGGGAT CATCGAGCGG
CTCACGCCGG GCGACTCCAC CGGCGGCGAG ATCATCGCGG GGACCGGCAC GATCGACCTG
TCCGGCGAGG TCGGCGCGAT CGGCGGGATC GTGCAGAAGC TGCATGGGGC TCAGCGCGAC
GGAGCCGGGT GGTTCCTCGC CCCGGCCGCC AACTGCGAGC AGGTCGTCGG GAACGTCCCG
GAGGGTCTGC AGGTCGTGCG CGTGGCGACG CTGTCCGACG CACGGGACGC CGTCGAGGCG
ATCGGGGCCG GCGACACCGC CGACCTGCCC AGCTGCTCCT GA
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| Protein sequence | MPENGRVVTR TYRNIPMPRS SLSPRSVLLA ASGLATFVLL AAILVVPAPY AIEQPGPTVD
TLGEVDDVEL ITIPDAETFP SEGQLRLTTV SVAGGPGFPV DAADVVQGWL SSAVAVVPVE
SVYQRGVSRE ELQSTSQAQM TTSQENATAA ALTELGYEVP TVLTVSAAVP DSGSDGVVEP
GDVVTSIQAP DGPLVPTETF PDLTQVLDGV APGSSVALGV ERDGEPETLD VVTGDDGNGG
SVLGVLIDPT FTFPIEVDIE IQDIGGPSAG TMFALGIIER LTPGDSTGGE IIAGTGTIDL
SGEVGAIGGI VQKLHGAQRD GAGWFLAPAA NCEQVVGNVP EGLQVVRVAT LSDARDAVEA
IGAGDTADLP SCS
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