Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_2835 |
Symbol | |
ID | 7860366 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | - |
Start bp | 3165387 |
End bp | 3166148 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643866932 |
Product | transcriptional regulator, IclR family |
Protein accession | YP_002882842 |
Protein GI | 229821316 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00508423 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGGTGC CGCAGCTGCC GGGGGCGACG CGCAACCAGG CCCTGGCCCG CGGGCTGCAC GTACTGCAGA TGGTCGTCGA CGAGGATGCG CCCCTGACCG GCACCGAGGT GGCGCGCAGG CTGGGCGTCC ACCAGAGCTC GGCGTCGCGG ATCCTCGCCA CGCTCACCGA GATCGGCTAT CTCCGCAAGA ACGACGCCGG TGCGTTCGCG CCCGACTACG GCGTGTTCGC ACTGGCGTCG GCCGCGACCC GGGTGTCGCT CCTGCGCACG GCGCGCGGGC CGATCGAGGC GTTCGCCGCC GACCACCCGG ACTTCATGCT GGCGATGTCG ATGCTGTGGC GCGACGAGCT GATCTACCTG CTCCGCGTCC GCCACGGCAC GGAGACGGTC ACGTTCTGGT CGGGTCACTT CCCGTTCAAC GTCTCGGTCC TGGCGCTCAA GCTCGTGCTG GACCTGCCCG AGGAGGAGGC CCTCGAGATC CTGCGCGCCT CCCGCCGTCG CGACGGATGG GGAGGTGACC CCGCCGTCGT CGCGGACACG GAGGAGGGCG TGCTGGCCGC GGCCCGCGAG CTCCTCGCCG ACGACGTCCT CATCCTGGAG AACTGGCTCG CGCCCCACCA CATCGCCGGC GCCATCGATC TCGTCACGCC GGAGCCGCAC CCCGTCGCCC TCGCGCTCGT GGACGTCACA GGTTCCGTGG GTCCGGACAA GCTGAAGGTC CTTCTCCACC AGGCCCGCCG CGCCGTCGAG CAGAGCTTCT GA
|
Protein sequence | MTVPQLPGAT RNQALARGLH VLQMVVDEDA PLTGTEVARR LGVHQSSASR ILATLTEIGY LRKNDAGAFA PDYGVFALAS AATRVSLLRT ARGPIEAFAA DHPDFMLAMS MLWRDELIYL LRVRHGTETV TFWSGHFPFN VSVLALKLVL DLPEEEALEI LRASRRRDGW GGDPAVVADT EEGVLAAARE LLADDVLILE NWLAPHHIAG AIDLVTPEPH PVALALVDVT GSVGPDKLKV LLHQARRAVE QSF
|
| |