Gene Bcav_2835 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2835 
Symbol 
ID7860366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3165387 
End bp3166148 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content71% 
IMG OID643866932 
Producttranscriptional regulator, IclR family 
Protein accessionYP_002882842 
Protein GI229821316 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00508423 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGTGC CGCAGCTGCC GGGGGCGACG CGCAACCAGG CCCTGGCCCG CGGGCTGCAC 
GTACTGCAGA TGGTCGTCGA CGAGGATGCG CCCCTGACCG GCACCGAGGT GGCGCGCAGG
CTGGGCGTCC ACCAGAGCTC GGCGTCGCGG ATCCTCGCCA CGCTCACCGA GATCGGCTAT
CTCCGCAAGA ACGACGCCGG TGCGTTCGCG CCCGACTACG GCGTGTTCGC ACTGGCGTCG
GCCGCGACCC GGGTGTCGCT CCTGCGCACG GCGCGCGGGC CGATCGAGGC GTTCGCCGCC
GACCACCCGG ACTTCATGCT GGCGATGTCG ATGCTGTGGC GCGACGAGCT GATCTACCTG
CTCCGCGTCC GCCACGGCAC GGAGACGGTC ACGTTCTGGT CGGGTCACTT CCCGTTCAAC
GTCTCGGTCC TGGCGCTCAA GCTCGTGCTG GACCTGCCCG AGGAGGAGGC CCTCGAGATC
CTGCGCGCCT CCCGCCGTCG CGACGGATGG GGAGGTGACC CCGCCGTCGT CGCGGACACG
GAGGAGGGCG TGCTGGCCGC GGCCCGCGAG CTCCTCGCCG ACGACGTCCT CATCCTGGAG
AACTGGCTCG CGCCCCACCA CATCGCCGGC GCCATCGATC TCGTCACGCC GGAGCCGCAC
CCCGTCGCCC TCGCGCTCGT GGACGTCACA GGTTCCGTGG GTCCGGACAA GCTGAAGGTC
CTTCTCCACC AGGCCCGCCG CGCCGTCGAG CAGAGCTTCT GA
 
Protein sequence
MTVPQLPGAT RNQALARGLH VLQMVVDEDA PLTGTEVARR LGVHQSSASR ILATLTEIGY 
LRKNDAGAFA PDYGVFALAS AATRVSLLRT ARGPIEAFAA DHPDFMLAMS MLWRDELIYL
LRVRHGTETV TFWSGHFPFN VSVLALKLVL DLPEEEALEI LRASRRRDGW GGDPAVVADT
EEGVLAAARE LLADDVLILE NWLAPHHIAG AIDLVTPEPH PVALALVDVT GSVGPDKLKV
LLHQARRAVE QSF