| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_2790 |
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| Symbol | |
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| ID | 7861198 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | - |
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| Start bp | 3111032 |
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| End bp | 3111889 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 643866887 |
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| Product | type II secretion system protein |
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| Protein accession | YP_002882797 |
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| Protein GI | 229821271 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4965] Flp pilus assembly protein TadB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.720201 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0010112 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGGCGCCG TCGCGGGCCT GCTCCTCGGA GCCGGGATCG TGACCGCCTG GTCGGCGTGG
TGGCCTCGAT CGACGTCGCC TCGGCCGGCC ACCGGATGGA CGGCGCGAGC CCAGGACGAG
CTCGTCCAGG CGGGTCTCCA CGGCGTGAGC CTGCGGACCT TCGTCGGCGT CTGTCTCGGC
CTCGGCCTGA TCGTCGCGAC GGCGGCCTTC GCGGTCGGCT CCGGGGCGAG CATCGCAGCC
GCGTTCGGAC TCATCGCCGC AGCGGCGCCC ACGGTCTACG TGCGTGGGCG TGCCCGGCGC
CGCCGGGTGG AGCTGCGGCA GGTGTGGCCC GACGTCGTCG ACGACCTCAC CTCAGCGGTC
CGAGCAGGGA TGACCCTCCC CGAGGCCCTC ATCTCCCTGT CGGAGCGAGG ACCCCAGGAG
GTGCGCGCCG AGCTGCACGC CTTCGCCGTC GACTACCGAG CCTCCGGGCG GTTCGTGGCC
TCGCTCGACG CACTCAAGGA GCGGCTCGCC GATCCCGTCG CCGACCGCAT CGTCGAGACC
CTCCGGATCG CCACCGACGT CGGCGGCAGC GACCTCGGCC GCATGCTCCG GACCCTGTCG
GAGTTCCTCC GGGACGACCT GCGCACCCGC GGCGAGCTCG AGGCCAGGCA GTCGTGGACG
GTCAACGGTG CCCGGCTCGC CGTCGCCGCG CCGTGGGTCG TGCTGGCCCT CATGAGCACC
CGGCCCGAGA CCGCCGCCGC GTTCGACACC CCGGCCGGCG TCCTCATGCT GCTGGCCGGC
GGGCTGACAT GCGTCGTCGC CTACCTCGCC ATGATGCGGA TCGGCCGCCT CGCCGAGGAT
CCGCGGGTGC TGCGATGA
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| Protein sequence | MGAVAGLLLG AGIVTAWSAW WPRSTSPRPA TGWTARAQDE LVQAGLHGVS LRTFVGVCLG
LGLIVATAAF AVGSGASIAA AFGLIAAAAP TVYVRGRARR RRVELRQVWP DVVDDLTSAV
RAGMTLPEAL ISLSERGPQE VRAELHAFAV DYRASGRFVA SLDALKERLA DPVADRIVET
LRIATDVGGS DLGRMLRTLS EFLRDDLRTR GELEARQSWT VNGARLAVAA PWVVLALMST
RPETAAAFDT PAGVLMLLAG GLTCVVAYLA MMRIGRLAED PRVLR
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