| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_2789 |
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| Symbol | |
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| ID | 7861197 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | - |
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| Start bp | 3110088 |
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| End bp | 3111035 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 643866886 |
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| Product | type II secretion system protein |
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| Protein accession | YP_002882796 |
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| Protein GI | 229821270 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4965] Flp pilus assembly protein TadB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00278324 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCGACC CCGTGGCCCC GGGCACCCTC GCGGCGATCG GCGCGCTCGC CGGCCTCGGC
CTCGGGATCG GGCTCGTCAC GGTCTGGTGG CGGCTCGCCG CCCGCCGTGT GCGGTTCGCG
GACCGGGTCG GCCCCTACGT GCGGGCTAGG CGCGCGACGT CGACCCTGCT CCCCGCCAGC
GACGGCGCCG CCTCCGCCCT CGAGCGGCTC ATCGCCCCCG TGGTCGGCGA CGTCGGGAAG
CTCCTCGAAC GGCTCGGGAG CTCGTCGTCG AGCATCCGCC GTCGCCTCGC GCTCGCCGGC
GGGCGGACGA GCGTCGACGC GTTCCGCGTG GAGCAGGTGG CCTGGGGTGC GGCCGGACTC
GCTCTCGGCC TGGCCCTGGC GATCGTCATC GGTGTGACCC GGGGCGTCAG CCCCGTACCG
CTCGCTGTGC TCGTTGCTCT CGCCGCCGTC GCCGGGATGC TGCTGCGGGA CCGGCGCCTC
ACGCGCCAGG TCCGGGCGCG CGAGGCGCGG ATCATGGCCG AGTTCCCGAC CGTCGCCGAG
CTGCTCGCCC TGGCCGTGAG TGCCGGGGAG GCTCCGGTCG CCGCCCTCGA CCGCGTGGCT
CGCTCGACGC AGGGCGAGCT GTCGGCGGAG CTCGGCCGCA CCCTGGCGGA CGTCCGGGCC
GGGGCCACGA TGGCCGGCGC CCTCGAGGGC CTCGCGCGCC GCACCGACCT GCCGGCCGTC
TCCCGGTTCG CGGACGGCGT GGCCGTCGCG ATCGAGCGGG GCAGCCCGCT CGCCGACGTG
CTGCGCGCCC AGGCCGCTGA CGCGCGCGAC GCCGGCAAGC GCGAGCTCAT GGAGTCCGGC
GGTCGCAAGG AGGTGGCGAT GATGATCCCG GTGGTCTTCC TCGTCCTCCC GGTGACCGTC
GTCTTCGCAC TCTTCCCCGG TCTCGCAGTC CTGCGGGTGG GGTTCTGA
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| Protein sequence | MSDPVAPGTL AAIGALAGLG LGIGLVTVWW RLAARRVRFA DRVGPYVRAR RATSTLLPAS
DGAASALERL IAPVVGDVGK LLERLGSSSS SIRRRLALAG GRTSVDAFRV EQVAWGAAGL
ALGLALAIVI GVTRGVSPVP LAVLVALAAV AGMLLRDRRL TRQVRAREAR IMAEFPTVAE
LLALAVSAGE APVAALDRVA RSTQGELSAE LGRTLADVRA GATMAGALEG LARRTDLPAV
SRFADGVAVA IERGSPLADV LRAQAADARD AGKRELMESG GRKEVAMMIP VVFLVLPVTV
VFALFPGLAV LRVGF
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