Gene Bcav_2673 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2673 
Symbol 
ID7861558 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2971398 
End bp2971802 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content74% 
IMG OID643866769 
ProductEndoribonuclease L-PSP 
Protein accessionYP_002882680 
Protein GI229821154 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0251] Putative translation initiation inhibitor, yjgF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0780712 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGAGA TCACACTGCT GCGGCCTCCC GGGCTCGTCG CGAGCCCCGC ATTCAGCCAC 
GTCGCGGTCG TGCCCCCGGG CGCGACCACC ATCCTCGTCG GCGGCCAGAA CGCCGTCGAC
GCCGAGGGCG CCCTCGTCGG GGGCGACGAC GTCGCGGCCC AGGTGACCCG GGTGATGGAG
AACCTCGTCG TCGCGCTCGA GGCCGCCGAC GTCGGCCTGG CGGACGTCGT CAGCATGACG
ATCCTGTTCC TGGACGGCGT CGACCTCGAC GCCGCCTACG GCGCAGCCAT GCCGTTCCTC
GGGTCCCTCA CCGAACCGCC GCTGGTGACC GGAGCGCGCG TCGCGGGGCT CGGAGTACCC
GGCGCTCTGG TCGAGGTGTC GGCCGTGGCG GCCGTCGTGC GCTGA
 
Protein sequence
MDEITLLRPP GLVASPAFSH VAVVPPGATT ILVGGQNAVD AEGALVGGDD VAAQVTRVME 
NLVVALEAAD VGLADVVSMT ILFLDGVDLD AAYGAAMPFL GSLTEPPLVT GARVAGLGVP
GALVEVSAVA AVVR