Gene Bcav_2642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2642 
Symbol 
ID7861524 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2940429 
End bp2942111 
Gene Length1683 bp 
Protein Length560 aa 
Translation table11 
GC content68% 
IMG OID643866735 
Productputative ABC transporter ATP-binding protein 
Protein accessionYP_002882649 
Protein GI229821123 
COG category[R] General function prediction only 
COG ID[COG0488] ATPase components of ABC transporters with duplicated ATPase domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.520141 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGAGT ACATCTACTC GATGGTCCGC GCACGCAAGG CGCACGGCGA CAAGCTCATC 
CTCGACGACG TCTCGATGTC GTTCCTGCCG GGCGCCAAGA TCGGCGTCGT CGGCCCGAAC
GGGGCCGGGA AGTCCACGAT CCTCAAGATC ATGGCCGGGC TCGACACGCC GTCGAACGGC
GAGGCTCGGC TCTCGCCGGG GTACACGGTC GGGATCCTTC TGCAGGAGCC GCCGCTGAAC
GAGTCGAAGA CGGTGCTCGG CAACGTCCAG GAGGCCGTCG CGGACATCCT CGCCAAGAAG
CAGCGGTTCG ACGAGATCGG TGAGGAGTTC GCCAACCCGG ACGCGGACTA CGACGCGCTC
ATGGCGGAGA TGGGCAAGCT GCAGGAGGCG ATCGACACCG CCGACGCGTG GGACATCGAC
TCCAAGCTCG AGCAGGCCAT GGACGCGCTG CGCTGCCCGC CCCCGGACGC CGACGTCACG
CTGTTGTCCG GAGGCGAGCG GCGCCGCGTC GCGCTCTGCA AGCTGCTGCT GGAGGAGCCC
GATCTCCTGC TGCTCGACGA GCCGACGAAC CACCTGGACG CCGAGTCGGT GCTCTGGCTG
GAGCAGCACC TCGCGCGGTA CCCCGGCGCC GTCCTCGCGG TCACGCACGA CAGGTACTTC
CTCGACCGCG TCGCCCAGTG GATCGCCGAG GTCGACCGGG GCCGCCTGTA CCCGTACGAG
GGCAACTACT CGACGTACCT CGAGAAGAAG TCCGAGCGCC TGAAGATCCA GGGCAAGAAG
GACGCCAAGC TCGCCAAGCG TCTCGCCTCG GAGCTCGAGT GGGTGCGACA GAACGCCAAG
GGTCGGCAGG CCAAGTCGAA GTCCCGACTC GCGCGCTACG AGGAGATGGC GGCCGAGGCG
GAGCGGACCC GCAAGCTCGA CTTCGAGGAG ATCCAGATCC CGCCGGGCCC GCGCCTCGGC
TCCGTGGTCA TCGAGGCGAC CAACCTGCGC AAGGGCTTCG GCGACCGGAT GCTCATCGAC
GGGCTCTCGT TCACGCTGCC GCGGAACGGG ATCGTCGGCG TCATCGGCCC GAACGGCGTC
GGCAAGACCA CGCTGTTCAA GACCATCGTC GGGCTCGAGG AGCTCGACGC CGGTGAGCTG
AAGATCGGCG AGACGGTCAA GATCTCCTAC GTCGACCAGT CGCGCGGGGG CATCGACCCG
GAGAAGACGC TGTGGGAGGT CGTCTCGGAC GGGCTCGACT ACATCCAGGT CGGCAACGTC
GAGATCCCGT CACGCGCCTA CGTCTCGCAG TTCGGGTTCA AGGGTCCGGA CCAGCAGAAG
CCTGCCGGGG TCCTGTCGGG CGGCGAGCGG AACCGGCTCA ACCTGGCGCT CACGCTGAAG
CAGGGCGGGA ACCTGCTCCT GCTGGACGAG CCGACCAACG ACCTCGACGT CGAGACCCTC
GGTTCGCTGG AGAACGCGCT GCTCGAGTTC CCGGGCTGCG CCGTCGTGGT CTCCCACGAC
CGGTGGTTCC TCGACCGCGT CGCGACGCAC ATCCTCGCGT ACGAGGGCGA CGAGGCCGAC
CCGGCGCAGT GGCACTGGTT CGAGGGGAAC TTCGCGGCCT ACGAGGAGAA CAAGGTCGAG
CGGCTCGGTC CCGAGGCGGC GCGTCCGCAC CGCGTCACCT ACCGCAAGCT CACGCGCGAC
TGA
 
Protein sequence
MAEYIYSMVR ARKAHGDKLI LDDVSMSFLP GAKIGVVGPN GAGKSTILKI MAGLDTPSNG 
EARLSPGYTV GILLQEPPLN ESKTVLGNVQ EAVADILAKK QRFDEIGEEF ANPDADYDAL
MAEMGKLQEA IDTADAWDID SKLEQAMDAL RCPPPDADVT LLSGGERRRV ALCKLLLEEP
DLLLLDEPTN HLDAESVLWL EQHLARYPGA VLAVTHDRYF LDRVAQWIAE VDRGRLYPYE
GNYSTYLEKK SERLKIQGKK DAKLAKRLAS ELEWVRQNAK GRQAKSKSRL ARYEEMAAEA
ERTRKLDFEE IQIPPGPRLG SVVIEATNLR KGFGDRMLID GLSFTLPRNG IVGVIGPNGV
GKTTLFKTIV GLEELDAGEL KIGETVKISY VDQSRGGIDP EKTLWEVVSD GLDYIQVGNV
EIPSRAYVSQ FGFKGPDQQK PAGVLSGGER NRLNLALTLK QGGNLLLLDE PTNDLDVETL
GSLENALLEF PGCAVVVSHD RWFLDRVATH ILAYEGDEAD PAQWHWFEGN FAAYEENKVE
RLGPEAARPH RVTYRKLTRD