Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_2626 |
Symbol | |
ID | 7860795 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | + |
Start bp | 2921201 |
End bp | 2922568 |
Gene Length | 1368 bp |
Protein Length | 455 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643866719 |
Product | extracellular solute-binding protein family 1 |
Protein accession | YP_002882633 |
Protein GI | 229821107 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0491272 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGTCA CACAGGCAGC AGGACGCTCC AGGCGACGCG TCCTCGCATC GGGGGTCGCC GCGCTCGCGA GCGTTGCTCT TCTCGCGGCC TGCGGCGGCG GGGGCGACGG CGAGGAACCG ACCGGCGAGG ACACGGCCGG CGAGGAGACG GGTGCGTCGG GCGACTGGCC CGACCTGTCG GGCACGACGC TCGACGTCGT CTCCGACTGG TCCGGTGCCG AGCAGGCCAA CTTCGAGGAG GTCCTCGCGG GCTTCGAGGA GGCGACCGGC GCCACGGTCC AGTACACGAG CGCCGGCAAC GACGTGGCCA CCGTGCTGGG GACGCGCGTC GAGGGTGGCG ACCCACCCGA CGTCGCACTC ATCCCGCAGC CGGGGCTGAT GGACCAGTTC GCCGCGGACG GCGCGCTCAT CGAGCTGCCG GAGGACGTGC TGGCCTCCGT GCAGGAGAAC TACTCGCAGT CGTGGCAGGA CCTCGGCACC GTCGACGGCA CGCCGTACGG CGTCTGGTTC AAGGCCGCGA ACAAGTCGAC GGTCTGGTAC AACGCCACCG TCTACGACAC GGCAGGGGCG AGCGCACCCG AGACGTGGGA CGACTTCGTC TCGACGCTCC AGCTCGTCTC CGACTCCGGC ACCCCGGGGC TCGCCGTCGG CGCCGACGTC GGCTGGCCGC TCACCGACTG GTTCGAGAAC GTCTACCTGC GGGTGGCGGG CGAGGACATG TACAACCAGC TCGCCGACCA CGAGATCCCG TGGACCGACC CGACGGTCGT CGACTCCCTG ACGATCCTCG GCGAGCTGTG GGGCAACGAC CAGCTCGTGC TCTCCGGCGG CGCGCAGCGC ACGTTCCCGG AGTCGGTCAC AGCCGTCTTC GGTGACCCGC CGCAGGCCGG CACCGTGTAC GAGGGCGACT TCGTGGCCGG CAACATCGCC GCCGACACGG AAGCCGTCGT CGGGACCGAC GCGCTGTTCT ACGCGTTCCC GTCGATCGAG GACTCGCCGC CGTCGGTGAT GGGTGGCGGC AACGTCGCGA TCGCGTTCAC CGAGGACGAG GGCACGATGG CGCTCATGCG CTACCTGGCC TCACCGGAAG CGGCGAACAT CTGGATCGAG CTCGGCGGGT TCACGTCGCC GAACATCAAC TCGGACTCGA GCCTCTACCC GGACGAGACG TCGCAGGCGA TCGCCGAGCA GCTCACCGGC GCCGAGGCGT TCGTGTTCGA CCTGTCCGAC CTCGCTCCGA GCGCGTTCGG CGGCACCCCG GGCCAGGGCT TCTGGCAGAT CATGATCGAC TTCTACAACG ACCCGTCCGA CCCGGCCGGA ACGGCGCAGC AGCTCGAGGA CGCAGCGGCC TCGGCATACG GAGGCTGA
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Protein sequence | MNVTQAAGRS RRRVLASGVA ALASVALLAA CGGGGDGEEP TGEDTAGEET GASGDWPDLS GTTLDVVSDW SGAEQANFEE VLAGFEEATG ATVQYTSAGN DVATVLGTRV EGGDPPDVAL IPQPGLMDQF AADGALIELP EDVLASVQEN YSQSWQDLGT VDGTPYGVWF KAANKSTVWY NATVYDTAGA SAPETWDDFV STLQLVSDSG TPGLAVGADV GWPLTDWFEN VYLRVAGEDM YNQLADHEIP WTDPTVVDSL TILGELWGND QLVLSGGAQR TFPESVTAVF GDPPQAGTVY EGDFVAGNIA ADTEAVVGTD ALFYAFPSIE DSPPSVMGGG NVAIAFTEDE GTMALMRYLA SPEAANIWIE LGGFTSPNIN SDSSLYPDET SQAIAEQLTG AEAFVFDLSD LAPSAFGGTP GQGFWQIMID FYNDPSDPAG TAQQLEDAAA SAYGG
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