Gene Bcav_2626 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2626 
Symbol 
ID7860795 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2921201 
End bp2922568 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content70% 
IMG OID643866719 
Productextracellular solute-binding protein family 1 
Protein accessionYP_002882633 
Protein GI229821107 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0491272 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGTCA CACAGGCAGC AGGACGCTCC AGGCGACGCG TCCTCGCATC GGGGGTCGCC 
GCGCTCGCGA GCGTTGCTCT TCTCGCGGCC TGCGGCGGCG GGGGCGACGG CGAGGAACCG
ACCGGCGAGG ACACGGCCGG CGAGGAGACG GGTGCGTCGG GCGACTGGCC CGACCTGTCG
GGCACGACGC TCGACGTCGT CTCCGACTGG TCCGGTGCCG AGCAGGCCAA CTTCGAGGAG
GTCCTCGCGG GCTTCGAGGA GGCGACCGGC GCCACGGTCC AGTACACGAG CGCCGGCAAC
GACGTGGCCA CCGTGCTGGG GACGCGCGTC GAGGGTGGCG ACCCACCCGA CGTCGCACTC
ATCCCGCAGC CGGGGCTGAT GGACCAGTTC GCCGCGGACG GCGCGCTCAT CGAGCTGCCG
GAGGACGTGC TGGCCTCCGT GCAGGAGAAC TACTCGCAGT CGTGGCAGGA CCTCGGCACC
GTCGACGGCA CGCCGTACGG CGTCTGGTTC AAGGCCGCGA ACAAGTCGAC GGTCTGGTAC
AACGCCACCG TCTACGACAC GGCAGGGGCG AGCGCACCCG AGACGTGGGA CGACTTCGTC
TCGACGCTCC AGCTCGTCTC CGACTCCGGC ACCCCGGGGC TCGCCGTCGG CGCCGACGTC
GGCTGGCCGC TCACCGACTG GTTCGAGAAC GTCTACCTGC GGGTGGCGGG CGAGGACATG
TACAACCAGC TCGCCGACCA CGAGATCCCG TGGACCGACC CGACGGTCGT CGACTCCCTG
ACGATCCTCG GCGAGCTGTG GGGCAACGAC CAGCTCGTGC TCTCCGGCGG CGCGCAGCGC
ACGTTCCCGG AGTCGGTCAC AGCCGTCTTC GGTGACCCGC CGCAGGCCGG CACCGTGTAC
GAGGGCGACT TCGTGGCCGG CAACATCGCC GCCGACACGG AAGCCGTCGT CGGGACCGAC
GCGCTGTTCT ACGCGTTCCC GTCGATCGAG GACTCGCCGC CGTCGGTGAT GGGTGGCGGC
AACGTCGCGA TCGCGTTCAC CGAGGACGAG GGCACGATGG CGCTCATGCG CTACCTGGCC
TCACCGGAAG CGGCGAACAT CTGGATCGAG CTCGGCGGGT TCACGTCGCC GAACATCAAC
TCGGACTCGA GCCTCTACCC GGACGAGACG TCGCAGGCGA TCGCCGAGCA GCTCACCGGC
GCCGAGGCGT TCGTGTTCGA CCTGTCCGAC CTCGCTCCGA GCGCGTTCGG CGGCACCCCG
GGCCAGGGCT TCTGGCAGAT CATGATCGAC TTCTACAACG ACCCGTCCGA CCCGGCCGGA
ACGGCGCAGC AGCTCGAGGA CGCAGCGGCC TCGGCATACG GAGGCTGA
 
Protein sequence
MNVTQAAGRS RRRVLASGVA ALASVALLAA CGGGGDGEEP TGEDTAGEET GASGDWPDLS 
GTTLDVVSDW SGAEQANFEE VLAGFEEATG ATVQYTSAGN DVATVLGTRV EGGDPPDVAL
IPQPGLMDQF AADGALIELP EDVLASVQEN YSQSWQDLGT VDGTPYGVWF KAANKSTVWY
NATVYDTAGA SAPETWDDFV STLQLVSDSG TPGLAVGADV GWPLTDWFEN VYLRVAGEDM
YNQLADHEIP WTDPTVVDSL TILGELWGND QLVLSGGAQR TFPESVTAVF GDPPQAGTVY
EGDFVAGNIA ADTEAVVGTD ALFYAFPSIE DSPPSVMGGG NVAIAFTEDE GTMALMRYLA
SPEAANIWIE LGGFTSPNIN SDSSLYPDET SQAIAEQLTG AEAFVFDLSD LAPSAFGGTP
GQGFWQIMID FYNDPSDPAG TAQQLEDAAA SAYGG