| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_2538 |
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| Symbol | |
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| ID | 7857830 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | - |
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| Start bp | 2824809 |
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| End bp | 2825357 |
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| Gene Length | 549 bp |
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| Protein Length | 182 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 643866631 |
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| Product | 16S rRNA processing protein RimM |
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| Protein accession | YP_002882547 |
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| Protein GI | 229821021 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0806] RimM protein, required for 16S rRNA processing |
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| TIGRFAM ID | [TIGR02273] 16S rRNA processing protein RimM |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.139064 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.135293 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAGCAGCA CCGATCAGGA TGACGACGTC GTCCTCGCCA GGCTGGGCGC CGCGCTCGGC
TTGCGCGGCG AGGTCCGCCT GACGGTCCGG ACCGACGACG AGAACCGGCT CGCGCCGGGC
ACGAAGGTGC GGACCGACCC GCCGGCCGCC GGACCCCTCA CGATCGCCCG GCTGCGCCGC
ACCGGCGCGG GGTACGTCAT CGCGTTCGCC GAGATCGCCG ACCGCACCGC CGCGGAGGCG
CTGCGCGGCG TCGAGCTGGT CGCCGAGCCG CGCGTCGACG ACGACGCCTG GTACCCGCGG
GAGCTCGTGG GCCTGGAAGC CGTCACCCCG GACGGTCACG TGCTCGGCGA GGTGGTCGCC
GTCGAGCACC CGCCCGCGCA CGACGTGCTC GTGGTCGTCG AGCCGTCCGG CGCGCACGCG
CTGGTCCCGT TCGTCACCGC CCTCGTGCCG AGCGTCGACG TCGCGGCAGG TCGCGTCGTC
GTCGACCCGC CCGGAGGGCT CTTCATCGAC CACCCGGCTG GCGCTGCCGA CCTCGACGAC
GATGACTGA
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| Protein sequence | MSSTDQDDDV VLARLGAALG LRGEVRLTVR TDDENRLAPG TKVRTDPPAA GPLTIARLRR
TGAGYVIAFA EIADRTAAEA LRGVELVAEP RVDDDAWYPR ELVGLEAVTP DGHVLGEVVA
VEHPPAHDVL VVVEPSGAHA LVPFVTALVP SVDVAAGRVV VDPPGGLFID HPAGAADLDD
DD
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