Gene Bcav_2534 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2534 
Symbol 
ID7857826 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2821253 
End bp2822074 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content76% 
IMG OID643866627 
ProductRibonuclease H 
Protein accessionYP_002882543 
Protein GI229821017 
COG category[L] Replication, recombination and repair 
COG ID[COG0164] Ribonuclease HII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.972855 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.308126 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCGGCGC GGACGACGAG ACGCTCGGCG GGGAGCACCC GGCGGCTCGC GCCGTCCCGC 
GCGTTCGAGC GCGAGCTCGC CGAGAGCGTG CCGGGCGGGC TCGTGGCCGG GATGGACGAG
GTGGGGCGCG GGTGCCTGGC CGGGCCGGTG TCGGTCGGCG TCGTCGTGGT CGGTCCGGCG
ACCGGGCGCA CGCCCGCGGG CCTACGGGAC TCCAAGCTCC TCACCCCGGC CGCGCGAGAA
CGGCTCGTGC CGCCGGTGCG CCGGTGGGCA TTCGCGTCGG CGGTGGCGCA CGCGAGCGCT
GCGGAGATCG ACGAGATCGG GATCATCGCC GCGCTGCGGC TCGCCGGACA CCGCGCCCTC
GGGTCGCTCG CCGCTGACGG CGTCGTCCCC GGCGCGCTCA TCCTCGACGG CTCCCACGAC
TGGCTGACCC CGCCCCAGCC CGACCTCTTC GAGGCGCTCG AGCCGCCCGT CGCGCCCACG
GCGTTCGTCC CGCCGGTACG GATGCGCGTG AAGGCCGACC TCACGTGCTC GGTCGTCGCG
GCCGCCAGCG TGCTCGCCAA GTGCGAGAGG GACGGGCTCA TGCGCGTCCT GCACGACGAC
CACCCCGACT TCGACTGGGC GTCGAACAAG GGGTACGCCG CGCCGGAGCA CCTGGCGGCA
CTGCGCGAGC TCGGGCCGAC GGTGCTGCAC CGCCGCAGCT GGCGGCTCCC CGGCACCGGC
GAGGATGCTC TGCTGGGCGT CGATCCGGAC GACGCCGTCG AGCCTGCCGA CGCCGGCGAC
CGCGCCGCGC TCTCCCTCGA ACCGGGCATG ATGGTGCCGT GA
 
Protein sequence
MSARTTRRSA GSTRRLAPSR AFERELAESV PGGLVAGMDE VGRGCLAGPV SVGVVVVGPA 
TGRTPAGLRD SKLLTPAARE RLVPPVRRWA FASAVAHASA AEIDEIGIIA ALRLAGHRAL
GSLAADGVVP GALILDGSHD WLTPPQPDLF EALEPPVAPT AFVPPVRMRV KADLTCSVVA
AASVLAKCER DGLMRVLHDD HPDFDWASNK GYAAPEHLAA LRELGPTVLH RRSWRLPGTG
EDALLGVDPD DAVEPADAGD RAALSLEPGM MVP