| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_2401 |
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| Symbol | |
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| ID | 7858954 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | - |
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| Start bp | 2689043 |
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| End bp | 2689972 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 643866497 |
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| Product | pseudouridine synthase, RluA family |
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| Protein accession | YP_002882413 |
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| Protein GI | 229820887 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.556381 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGAGC GACGCAGCCT GCCCGTGCCG GACGGGCTCG CGGGTGAGCG CGTGGACGTC
GGGATGGCAC GTCTGCTCGG GCTCTCCCGC TCCGCGGCGG CCGACCTCGC CGCGGCGGGT
CGGGTGCTGC TGGACGGCGC CGCGGCCGGG AAGTCGGACC GGCTCGCGGC CGGGGCGTGG
CTGGAGGTCG AGCTGCCGGA GGCCGCGGAG CCTCCGCAGG TCGTGGCCGA ACCCGTGCCC
GGGATGCGGA TCGTGTACTC CGACGACGAC GTGGTCGTCG TCGACAAGCC CGTCGGCGTC
GCCGCCCACC CCTCGCCCGG GTGGAGCGGG CCTACCGTGA TCGGCGCGCT CGCCGCCGCC
GGTGTGCGCG TGTCGACGTC CGGCGCGGCG GAGCGGCAGG GCGTGGTGCA CCGCCTCGAC
GTCGGGACGT CGGGGCTCAT GGCCGTGGCC AAGAGCGAGC GCGCCTACTC GGTGCTCAAA
CGCGCGTTCA AGGAACGCAC GGTGACGAAG GTCTACCACG CGCTCGTCCA GGGGCACCCG
GACCCGAGCG CCGGGACGAT CGACGCCCCG ATCGGGCGGC ACCCGCGGCA CGACTACAAG
TGGGCTGTCG TCGCCGACGG CAAGCCCTCG GTCACGCACT ACGAGACGCT CGAGGCGATG
CCGGCGGCGA GCCTGCTGGA GGTCCACCTC GAGACCGGGC GGACGCACCA GATCCGCGTG
CACATGGCGG CCGTCAAGCA CCCGTGCGTC GGCGACGTGA CGTACGGGGC CGATCCCCGG
CTGGCGGAAC GACTCGGCCT GACGCGGCAG TGGCTGCACG CCGTCCGGCT CGGCTTCGAG
CACCCGGTGA CGGGGGAGTG GACAGAGGTG ACGTCCGACT ACCCCGCAGA CCTGGCGGCG
TCCCTGGAGG CGCTCCGGGA CGGAGCATGA
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| Protein sequence | MAERRSLPVP DGLAGERVDV GMARLLGLSR SAAADLAAAG RVLLDGAAAG KSDRLAAGAW
LEVELPEAAE PPQVVAEPVP GMRIVYSDDD VVVVDKPVGV AAHPSPGWSG PTVIGALAAA
GVRVSTSGAA ERQGVVHRLD VGTSGLMAVA KSERAYSVLK RAFKERTVTK VYHALVQGHP
DPSAGTIDAP IGRHPRHDYK WAVVADGKPS VTHYETLEAM PAASLLEVHL ETGRTHQIRV
HMAAVKHPCV GDVTYGADPR LAERLGLTRQ WLHAVRLGFE HPVTGEWTEV TSDYPADLAA
SLEALRDGA
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