Gene Bcav_2398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2398 
Symbol 
ID7858951 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2684308 
End bp2684841 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content75% 
IMG OID643866494 
ProductNUDIX hydrolase 
Protein accessionYP_002882410 
Protein GI229820884 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.10425 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.260078 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGGACG CGCCCACGCG GTTCAGCCTC GTCCCGGCGG CGTACCTGGC GCTGCTGCGG 
GACGGCGACG GCGGCACCGA GGTGCTGCTG CAGCTCCGTC AGGGCACGGG CTACATGGAC
GGGTACTGGG CGTGTGCCGC GGCGGGTCAC GTGGAGGCCG GCGAGAGCGT GCTCGCGGCG
GCTGTCCGGG AGACCGCGGA GGAGCTCGGC GTCGTCGTCG CCCCCTCGGA CCTGGAGCCG
CTCACCGCGA TGCACCGGAC GGACACGGAC GCGCCCGACG ACCAGCGCAT CGACATGTTC
TTCGCCTGTC GGCGATGGTC GGGCGAGCCG CGGATCGTGG AGCCGCAGAA GGCGGCGGAC
CTCGCGTGGT GGCCGCTCGC CGCGCTGCCC GACCCGGTGG TGCCGCACGA GCTCGCCGTG
CTCGAGCGGC TCCGCGACGC GTCGCTGAGC ACGGTCATGA CGTTCGGGTT CGCCGACGAC
GGCGTCCACA CGGTGCCGCC TCCGGCGGCT GTCGACCGGG GCGCCCTCAG CTGA
 
Protein sequence
MQDAPTRFSL VPAAYLALLR DGDGGTEVLL QLRQGTGYMD GYWACAAAGH VEAGESVLAA 
AVRETAEELG VVVAPSDLEP LTAMHRTDTD APDDQRIDMF FACRRWSGEP RIVEPQKAAD
LAWWPLAALP DPVVPHELAV LERLRDASLS TVMTFGFADD GVHTVPPPAA VDRGALS