Gene Bcav_2342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2342 
Symbol 
ID7858891 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2623787 
End bp2624746 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content73% 
IMG OID643866435 
ProductABC transporter related 
Protein accessionYP_002882355 
Protein GI229820829 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.2832 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCAGTCG ACGCCGTACG CGTGCGAGGT CTCGTCAAGT CCTACGCCGG TCGCGCCGTC 
GTCGACCGCC TGGACCTCAC GGCACCCAGG GGCGCCGTCA CCGCCGTCCT CGGGCCGAAC
GGCGCCGGCA AGACGACGAC GATCGAGTGC TGCGAGGGCC TGCGGCGGCA GGATGCCGGG
ACGATCGAGG TGCTCGGGCT CAATCCGCTC AGGGACGCCG CGCAGCTCCA CGCCCGGGTC
GGCGTGATGC TGCAGGACGG CGGTCTGCCG AACTCGGCTC GCGCGCAGCA GGTGCTCGCG
CTCGCCGCGG CGATGCACGC CGCCCCGGCC GACGTCGTCG CGGTGTCGGC CCGGCTCGGG
ATCGACGCGT TCGCCCGAAC TCCCGTCCGG CGACTCTCCG GCGGCCAGCG CCAACGCCTC
GCGCTGGCCG TGGCGATCAT CGGCCGACCC GAGCTCGTGT TCCTCGACGA ACCCAGCGCC
GGACTCGATC CCCAGTCGCG GCACGCGGTG TGGGAGCTCG TGCGCGAGCT GCGCGACGGC
GGCACGTCGG TCGTGCTCAC GACGCACCTC ATGGACGAGG CCGAGCAGCT CGCCGACCTC
GTGCACGTCG TCGACTCCGG CAGCGTGATC GCGTCCGGCG CTCCCGACGA GCTCATCACG
GCGCACGGCG GTCCGGACTC CCTCGCCGTG ACGATCGACC GGAGCCTCGG CGACGACGAG
CTCGCCGCAC TCGCGGCGTA CCTGAGTGCG GCGAGCGGGA CGCTCGTGGA GCTCGGCGTC
GGTCGCGCGA CTCACGATCC GGCGTCGACG GTCCTCGTGC ATGCCGAGTC GAGTCCGGCA
CTCGTCGCGG AGCTGGCCGC GTGGTGCCGT GCCGAGGGCG TGCTCATCAC CTCGCTGCGG
CGTGGAGCAC GCTCCCTCGA GGACACGTTC CTCGAGCTGA CGGGCCGGGA GATGCGATGA
 
Protein sequence
MPVDAVRVRG LVKSYAGRAV VDRLDLTAPR GAVTAVLGPN GAGKTTTIEC CEGLRRQDAG 
TIEVLGLNPL RDAAQLHARV GVMLQDGGLP NSARAQQVLA LAAAMHAAPA DVVAVSARLG
IDAFARTPVR RLSGGQRQRL ALAVAIIGRP ELVFLDEPSA GLDPQSRHAV WELVRELRDG
GTSVVLTTHL MDEAEQLADL VHVVDSGSVI ASGAPDELIT AHGGPDSLAV TIDRSLGDDE
LAALAAYLSA ASGTLVELGV GRATHDPAST VLVHAESSPA LVAELAAWCR AEGVLITSLR
RGARSLEDTF LELTGREMR