| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_2300 |
|---|
| Symbol | |
|---|
| ID | 7861912 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 2584500 |
|---|
| End bp | 2585156 |
|---|
| Gene Length | 657 bp |
|---|
| Protein Length | 218 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643866393 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_002882313 |
|---|
| Protein GI | 229820787 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2011] ABC-type metal ion transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.595775 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACTGGA ATCGTCTCGG CGACACCTTC CTCCTGGCCG TCCAGCAGAC GCTGTACATG
GTCGGCTGGA CGATGCTCGC CGGCGGGATC CTCGGGCTCG CGATCGGGAT CGGGCTGTAC
GTCACGCGGC GCGGGAACCT CCTGTCCAAC CGCGGGGTCT TCGCCGTCCT CAACCTCGCC
GTCAACATCG TGCGGCCGAT CCCGTTCCTC ATCTTCCTGG TGGCGATCGG GCCGCTCACG
CTGAACGTCG TCGGGACGAC GATCGGCACG GAGCCGGCGA CGTTCGCGAT GAGTCTCATG
GCGGGCTTCG TGTTCGCGCG CCTCGTGGAG CAGAACCTGG TGGCGATCGA TCCGGGGGTC
GTCGAGGCCG CCCGCGCGAT GGGCGCGTCG CCGTGGCGCA TCATCCGCAC GATCCTGATC
CCCGAGGCGC TCGCCCCGCT CATCCTGGGC TACACGTTCC TGTTCGTGGG CGTGCTCGAC
ATGTCGGCGA TGGCCGGGTA CGTCGGCGGC GGGGGTCTGG GCGACTTCGC GATCGTGTAC
GGATACCGGC AGTACGACTG GGGCGTGACG GCGATCGTCG TCGTCGTCAT GGTCGTCGTC
GTGCAGCTGG CCCAGTGGCT GGGGAACACG CTCGCGCGGG TCGCCCTGCG ACGGTGA
|
|---|
| Protein sequence | MDWNRLGDTF LLAVQQTLYM VGWTMLAGGI LGLAIGIGLY VTRRGNLLSN RGVFAVLNLA
VNIVRPIPFL IFLVAIGPLT LNVVGTTIGT EPATFAMSLM AGFVFARLVE QNLVAIDPGV
VEAARAMGAS PWRIIRTILI PEALAPLILG YTFLFVGVLD MSAMAGYVGG GGLGDFAIVY
GYRQYDWGVT AIVVVVMVVV VQLAQWLGNT LARVALRR
|
|---|
| |