Gene Bcav_2286 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2286 
Symbol 
ID7861898 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2568615 
End bp2569871 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content69% 
IMG OID643866379 
Productprotein of unknown function UPF0118 
Protein accessionYP_002882299 
Protein GI229820773 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0673264 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGTTGC CGCGCCTGTC GGCGCGACGG GAGCCCCCGC CCCCCGAGCC GGCGTCCGTC 
CGCTCCTCCT CCGCGCGATC CCTCCACTCG ACACGCAGCT CCCACGCGCA CGTGCGCAAG
CTCCCCGAGC GGTCCGCCCG GGCGACGGAA GTCGGCGACG GGACGCCGAT GTGGGTGCGG
AAGGCTGGCG GGTACTCCTG GCGGTTCCTC GTCGTCATCG CCGCGATCGC GATCGTCGTG
TACGGGCTGC TGCAGGTCCA GATCGTCTTC ATCGCCGTGT TCCTCGCGCT GGTCGTGACG
TCGGTGCTCG AACCGTTCGT CAGCTGGCTC TCACGCTGGA TGCCGCGAGC GATTGCCACC
GTCGTCGCGA TGCTGTCCGC GATCGTGTTC TTCGCGGGGC TGCTGACGTA CGTCGTCTAC
TCCGTCGCCG GGCAGTGGAC GGACCTCGCG AAACAGTTCA ACGACGGCAT CGGGCAGATC
TTCGATCTGC TCGAGAACAG CAACCTGCCG ATCACCATCA CCGCGGACGA CATCAACGAC
TGGATCGAGA CCGGCCGTCA GTGGCTCGTC GACCACTCCG GTGAGCTCGC CGGTCAGGTG
TTCGCGAACG CCGGCGGGGT GTTCGAGGCG TTCACGATCC TGGCACTCGG CACGTTCGTC
ACGATCTTCT TCCTCGTCTC CGGCGCGCGG ATGTGGCGCT GGTTCCTCAA CGAGCTGCCG
TCCCGCTCGC GCCTGACGGT GCACGGCGCG GCCGGTGCGG GCTGGTACAC GTTCTCCGGG
TACGCCCGCG GCACGGTCAT CATCGCCGTG ATCGACGGGG TGCTCGCCTA CATCCTGCTG
GTGATCGTCG GTGTCCCGCT CGCCGCACCG CTCGCCGTGC TCGTCTTCAT CGGTGCGTTC
ATCCCGCTCA TCGGCGCGCC AGCCGCCATG ATCATTGCGG CGATCGTCGC GCTGGCCGCG
AACGGCTTCT GGCCGGCCGT CATCGTGACG ATCGGCATCG CGGGTATCGG GCAGGTCGAG
GGCCACATCC TGCAGCCGCT GGTCATGGGC AAGCAGGTGT CGCTGCACCC GGTCGTGGTG
GCGCTCGGCG TCACGGCCGG CACGTTCCTC GGTGGCCTGC TCGGCGCCGT CATCGCGATT
CCGCTCATCG CCGTCATCTG GACCGTGTAC TCGAAGCTGC ACGTCAAGGA TCCGCCGCTC
GACGGCGCCC TGCCGTCCGC GCGGGAGCTC GCCACCAGGG ACTCCACCGG CGACTGA
 
Protein sequence
MRLPRLSARR EPPPPEPASV RSSSARSLHS TRSSHAHVRK LPERSARATE VGDGTPMWVR 
KAGGYSWRFL VVIAAIAIVV YGLLQVQIVF IAVFLALVVT SVLEPFVSWL SRWMPRAIAT
VVAMLSAIVF FAGLLTYVVY SVAGQWTDLA KQFNDGIGQI FDLLENSNLP ITITADDIND
WIETGRQWLV DHSGELAGQV FANAGGVFEA FTILALGTFV TIFFLVSGAR MWRWFLNELP
SRSRLTVHGA AGAGWYTFSG YARGTVIIAV IDGVLAYILL VIVGVPLAAP LAVLVFIGAF
IPLIGAPAAM IIAAIVALAA NGFWPAVIVT IGIAGIGQVE GHILQPLVMG KQVSLHPVVV
ALGVTAGTFL GGLLGAVIAI PLIAVIWTVY SKLHVKDPPL DGALPSAREL ATRDSTGD