Gene Bcav_2282 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2282 
Symbol 
ID7861894 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2566008 
End bp2566511 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content72% 
IMG OID643866375 
ProducttRNA/rRNA methyltransferase (SpoU) 
Protein accessionYP_002882295 
Protein GI229820769 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0219] Predicted rRNA methylase (SpoU class) 
TIGRFAM ID[TIGR00185] rRNA methylase, putative, group 2 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.760815 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGCC CGATCGCCCA CCTCATCTTT CACACACCGC GCATCCCCGG GAACACGGGG 
GCGGCGATCC GGCTTGCGGC GCTCACGGGC GCGACCCTGC ACCTGGTCGA GCCGCTCGGC
TTCGACATGT CCGAGGCGAA GCTGCGCCGC GCCGGCCTCG ACTACCACGA CCTCGCCCAC
GTCGTCGTGC ACCCTGACCT GGACGCCGCG CTCGACGCCG TCGGGTCCGG CACCCGCGTG
TACGCGTTCA CCGGGCACGC CGAGCGTTCG TTCGAGGACG TCCGGTACGC CGTCGGCGAT
GCCCTGCTGT TCGGCGCGGA ACCGACCGGC CTACCCCCCG AGGTGCTCGC CGACCCTCGC
CTCACCGACC GCGTCCGTAT CCCCATGCTC CCGGGACTGC GCTCGCTCAA CCTCGCCAAC
GCCGCAGCGG TAGCGGTGTA CGAGGTGTGG CGTCAGCATG GGTACCCCGG AGCCGCAGCG
CCGGGATCCA GTCCGACGGA GTGA
 
Protein sequence
MTSPIAHLIF HTPRIPGNTG AAIRLAALTG ATLHLVEPLG FDMSEAKLRR AGLDYHDLAH 
VVVHPDLDAA LDAVGSGTRV YAFTGHAERS FEDVRYAVGD ALLFGAEPTG LPPEVLADPR
LTDRVRIPML PGLRSLNLAN AAAVAVYEVW RQHGYPGAAA PGSSPTE