| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_2270 |
|---|
| Symbol | |
|---|
| ID | 7861882 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 2551063 |
|---|
| End bp | 2553081 |
|---|
| Gene Length | 2019 bp |
|---|
| Protein Length | 672 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 643866363 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002882283 |
|---|
| Protein GI | 229820757 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.417256 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGACTC GACGGACGTT CCTCGGCACC TGCGCGGCGG CGGGCGCCGT CGCTCTGACC
ACGGCGGCGC CCACCACGGC GGCGCCCGCA ACCGCCGTCC CGCGCGGGCG CGACCACCCT
GGGAGGCCGC GCCTGACGAA CCTGGACCAC CTGCGCTTCC TGCTCGACGA CGTCCCCCTC
GTGCCGTCCG GGACGCACAC CACGTACCGC ATCGAGGAGG AGCCGACGGC GCTCGCACCG
TGGACGTACG CGGACGCCGA CGGCGCGACG TTCCGCCGCA TCGGCGGCGG CGCGCTGGAC
CCGGCCACCG GGTACTACTC GCAGGGAGCC TTCAACGCCG ACGACATCGC GCGAGCCGCC
GTCGTCCTCC TCCGCGACTG GCGGGCGAGC GGCGACGAGC GCAGCAGGGA CGGCGCCCAC
GAGGTGCTCC GTGCCCTGGC GTACCTGCAG AACGACAGCG GCCCGGACGC CGGTCGTGTG
GTGCTGTGGC AGCAGGTGGA CGGAAGCCTC AACCCGAGCG CCGAGCCCGT CGAGCTGCCC
GACCCGTCCG ACTCCGCGGA GTCGTACTGG CTGGCGCGCA CGGTCTGGGC GTTCGGCGAG
GGGTACGCCG CGTTCCGCCG CGCCGACGCC GAGTTCGCGC GGTTCCTGCT CGAGCGGCTG
CACCTGTGCC TGGACGCCCT CGAGGCCGAG TCGCTGTCGC GGTACGGCCA GTGGGTGACC
AGCGACGGCG TGGACCTGCC CGCGTGGCTC GTCGTGGGCG GCGCGGACGC GACCGCCGAG
GCGATGCTCG GCCTCGTCGC CGTCGCCCGA GAGATGCCGC GCGAGCGTCG GTTCACGCGC
GCCCTCGACC GCTACGCCGA GGGTGTCGCT GCCATGGGTG GCGCGAGCGG GGCCGCGTGG
CCGTTCGGCG CCGTGCTCCC GTGGACCGGC GCCCTGGGTT TCTGGCACGC GTGGGGCGGC
GCGGCGCCGG AGGCGCTCGC GAGCGCGGGC CGCACACGCC GGCGGCGCGA CTGGGTACGG
GCGGCCATCG CCGACGCCGG CACGTTCACG CCGCTCGTGC TCGCCTCGGG CGGACCGCAC
AACGCGTGGA CCCCGGTGCC CGGCGAGGCG CAGATCGCGT ACGGCGCGCA CGGCCGGGTC
GCCGGTGTGC TCGCGGCCGC CGACGCGGGC GGAGGGCCGG GTCTCGACGT CCTGGCGGGC
CTGGCGGCCG GATGGTTCTT CGGCGCCAAC ACCGCCGGCG TCCGCGTGTA CGACCCGGCC
ACCGGCGTCA CGTTCGACGG CGTCGAGACG GACGGCCGCG TGAACCGGAA CTCCGGCGCG
GAGTCCACCA TCCACGGGCT GCTGGCGATG ATGCTGCTGG ACGACCGTCC CGAGGTCGCC
GAGCTGGCCA CCTCCGTGAC CGGTCTCGTC GCGCACGACG GGGTCAGCGC CGTCGACGCC
GAGAGTGCGC GGCTCAGCGC CGGGTGCACG ATCGTGCGGC CGGCGACGGG CGCGTGGACC
GGCGAGGGCA ACCTCACGGG CGGCGGGTAC GTGCACGTGC CCGCGGGGGA GTGGGTGGAG
TTCGACGTCG ACGCGCCCGC CGGGACGTGG GCGCTGCCGA TCGTGTGGCG CACGCGCGAG
GACGCCGGCT CGGCGCGCTG GGAGATCGTC GGCGGTCGGC GGCTCGGGGA GACGCTCAAC
GGCGGCACGG GCGACGCCGG CCTCACCGAG GTGGAGGGGA GTCTCGTCCC GCAGCTCCTG
GGGCGGCCGC TGCCCGCGGG GCCGCTGACC GTGCGCGTCA CGAGCGACGG CGACCTCCGC
CTCGACGCGC TGCTGCTGCG ACCCGCCGTC GCGACGGCGC ACTACGCGAC GACGTCGGGC
GACGCCGTGC TGTACGCGGG TTCGACCGAG AGGGCGACGA CGACGCCCGC GCTCGCCGCC
GGCCGCGGCT GGGCGTACGA CGCCGACGGC GACCGGCGCG GGCGGGTCTC GGGCGACCGC
GTCCGCGTCG CCGCGGGAGG CTTCACGATC ACGCGGTGA
|
|---|
| Protein sequence | MTTRRTFLGT CAAAGAVALT TAAPTTAAPA TAVPRGRDHP GRPRLTNLDH LRFLLDDVPL
VPSGTHTTYR IEEEPTALAP WTYADADGAT FRRIGGGALD PATGYYSQGA FNADDIARAA
VVLLRDWRAS GDERSRDGAH EVLRALAYLQ NDSGPDAGRV VLWQQVDGSL NPSAEPVELP
DPSDSAESYW LARTVWAFGE GYAAFRRADA EFARFLLERL HLCLDALEAE SLSRYGQWVT
SDGVDLPAWL VVGGADATAE AMLGLVAVAR EMPRERRFTR ALDRYAEGVA AMGGASGAAW
PFGAVLPWTG ALGFWHAWGG AAPEALASAG RTRRRRDWVR AAIADAGTFT PLVLASGGPH
NAWTPVPGEA QIAYGAHGRV AGVLAAADAG GGPGLDVLAG LAAGWFFGAN TAGVRVYDPA
TGVTFDGVET DGRVNRNSGA ESTIHGLLAM MLLDDRPEVA ELATSVTGLV AHDGVSAVDA
ESARLSAGCT IVRPATGAWT GEGNLTGGGY VHVPAGEWVE FDVDAPAGTW ALPIVWRTRE
DAGSARWEIV GGRRLGETLN GGTGDAGLTE VEGSLVPQLL GRPLPAGPLT VRVTSDGDLR
LDALLLRPAV ATAHYATTSG DAVLYAGSTE RATTTPALAA GRGWAYDADG DRRGRVSGDR
VRVAAGGFTI TR
|
|---|
| |