| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_2216 |
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| Symbol | |
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| ID | 7861412 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | - |
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| Start bp | 2493075 |
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| End bp | 2494541 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 643866308 |
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| Product | glutamate synthase, NADH/NADPH, small subunit |
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| Protein accession | YP_002882229 |
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| Protein GI | 229820703 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
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| TIGRFAM ID | [TIGR01317] glutamate synthases, NADH/NADPH, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.45323 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGACC CCCGCGGTTT CCTCAAGGTC CGCGACCGGG AGCTCCCCCT CTCGCGTCCG
GTGCCGATCC GGCTGATGGA CTGGCAGGAG GTCCACGCGC ACCGCGCGGA GGACTCGCCG
ATGCTCACGC GGCAGGCCGG GCGCTGCATG GACTGCGGCA TCCCGTTCTG CCACCAGGGC
TGCCCGCTCG GCAACCTCAT CCCGGACTGG AACGACCTCG TGTGGCGCGG CCAGTGGGCC
GACGCGAGCG AGCGCCTCCA CGCCACGAAC AACTTTCCGG AGTTCACGGG TCGCATCTGC
CCGGCGCCGT GCGAGAACGC GTGCGTGCTC GGCATCAACC AGCCGGCCGT GACGATCAAG
AACATCGAGG TCTCGATCAT CGACGAGGCG TTCGCCCGCG GGCTCGTGAC GCCGCAGGTG
CCGCAGCGGC TCACGGGCAG CACGGTCGCC GTCGTCGGAT CCGGACCGGC CGGGCTGGCG
GCCGCGCAGC AGCTCACGCG CGCGGGCCAC ACGGTCGTGG TGTTCGAGAA GGACGACGCG
ATCGGCGGCC TGCTGCGGTA CGGCGTGCCG GACTTCAAGC TGGAGAAGCA CCACATCGAC
CGCCGGGTCG CGCAGATGGA GGCCGAGGGC ACGCGGTTCC GCCCCGGCAC CCGGATCGGC
TCGGACCTCA CGTGGGACGA GCTGCGGACC CGCTTCGACG CCGTCGTCGT GGCCACCGGG
GCGTCCCTCG CGCGGGAGCT GCCCGTGCCG GGCCGCGAGC TCGACGGCGT CGTCCTCGCG
ATGGACTACC TCCACCAGGC CAACGCGGTG GTCGCCGGCC GGGACGTGCC GGACCAGATC
CACGCCGGCG GCAAGCACGT CATCATCATC GGCGGCGGGG ACACGGGCTC CGACTGCCTG
GGGACCGCGC TGCGCCACGG TGCCGCATCG GTCACGACCC TCGCGATCGG CAAGCAGCCG
CCGTACGAGC GGCCGCCGCA CCAGCCCTGG CCGACGACGC CGCTCGTGTT CGAGGTCTCG
ACCTCGCACG AGGAGGGCGG AACGCGTGAG TTCCTCGCGT CGACGGTGGA GCTCGTCGCT
GACGCCGACG GCCACGTGAC GATGCTGCGC GTGGCCGAGA CCGAGTACCT CGACGACGGC
CGGCGCGTGC CCCGCCCGGG CACCGAGCGG GAGATCCCCG CCGACCTCGT GCTCGTCGCC
ATGGGGTTCT CCGGTCCGGA GACGGCCGAC GTGACGGCGC AGCTCGGCCT CGGAGTGTCC
CCGCGCGGGC CGTTCGAGCG GGACGAGCAG TACCGGTCCA CGGTCCCCGG GGTGTACGTG
GCGGGCGACG CCGGCCGCGG CCAGTCGCTC ATCGTGTGGG CGATCGCCGA GGGCCGGGCG
GTCGCGGCCG AGGTCGACGC GTACCTCACG GGCAGCACCG AGCTGCCGGC GCCGGTGCGC
CCGTCGTCGC AGCCGATCGC CGTCTGA
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| Protein sequence | MADPRGFLKV RDRELPLSRP VPIRLMDWQE VHAHRAEDSP MLTRQAGRCM DCGIPFCHQG
CPLGNLIPDW NDLVWRGQWA DASERLHATN NFPEFTGRIC PAPCENACVL GINQPAVTIK
NIEVSIIDEA FARGLVTPQV PQRLTGSTVA VVGSGPAGLA AAQQLTRAGH TVVVFEKDDA
IGGLLRYGVP DFKLEKHHID RRVAQMEAEG TRFRPGTRIG SDLTWDELRT RFDAVVVATG
ASLARELPVP GRELDGVVLA MDYLHQANAV VAGRDVPDQI HAGGKHVIII GGGDTGSDCL
GTALRHGAAS VTTLAIGKQP PYERPPHQPW PTTPLVFEVS TSHEEGGTRE FLASTVELVA
DADGHVTMLR VAETEYLDDG RRVPRPGTER EIPADLVLVA MGFSGPETAD VTAQLGLGVS
PRGPFERDEQ YRSTVPGVYV AGDAGRGQSL IVWAIAEGRA VAAEVDAYLT GSTELPAPVR
PSSQPIAV
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