Gene Bcav_2203 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2203 
Symbol 
ID7861398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2479808 
End bp2481286 
Gene Length1479 bp 
Protein Length492 aa 
Translation table11 
GC content75% 
IMG OID643866294 
Productinner-membrane translocator 
Protein accessionYP_002882216 
Protein GI229820690 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0559] Branched-chain amino acid ABC-type transport system, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCACCCAC GCGTCCTGCG GCCCGAGGGT CGACGCGCCG TCGGGCGACG TGTCGCCCTG 
GGCCCTCCCC GGCGGTGGCA CGGCCCCCTC GTGGTCGCCG TCACGCTCGC GCTGGCCGTC
CTCGCGCTGC TGAACGTGTC CGCGGGGCCG GCTGCGGCCC AGCCGGCGGG CTGCGTGCCG
GACGCCGAGA CGGCCTGCAT CACGGGGACG ATCCGTACCG AGGCCGGCGA GGGCGCAGCC
GGGATCGTCA TCACGGTGAC CGGCGGTCCG GAGGAGCTCA CGGCGACGAC CGGTGACGAC
GGCCGCTGGG CCGTGGCCAT CACCGAGGCG GGCGAGTACG TCGTCGAGCT CGACACCGCG
ACCCTCCCCG CCGGCGAGAC CCTGCGCGAC CCCGGCGCGA ACCCGCGGAC GGTCACGGCG
AACCTCGGGT CGACCGTCGC CGCGGCGTTC CCGCTCGGGC CCCCGACCGG CGGGGGCGAG
CCCACCGAGG CGGCCACCGA CGAGGGCGAG GACGACCAGA CGACGGCGCC GCCCGCCGGC
TCCGGCGACG AGGGCGGCGT CACCGAGAGC GCGGAGACCG CGGCGAGCGG CGGCGACCTC
GGGACCCGCG TGCTGCAGCT GACGCTGAGC GGCCTCGTCT TCGGTCTGCT CCTGGCGCTC
GCCTCCGTCG GCCTGTCCCT CATCTACGGG ACGACGGGGC TCTCGAACTT CTCGCACGGC
GAGCTCGTCA CGCTCGGGGG CATCGTCGCG TACATCGCCG CCCAGTGGTG GGGGCTCTCC
CTCTTCCTCG CGGGCCTCGT CGCCGTCGTG GTCGGCGCGA TCATGGGGTA CGCCCAGAAC
GCGGTGCTGT GGGCGCCGCT GCGCCGCCGC GGCGTCGGGA TCACGCAGCA GATGATCGTG
ACCATCGGTC TCGCCGTCGC CCTGCAGTAC GCCCTGCACC TCATCGTCGG CGGCAACCCG
CTGCGCATCA GCACGGCGAA CCCGCCGATC ATCGACCTCG GACCCGTCCG CATCACCCAG
ACGTCGGCGA TCTCGGTGGG GATCGCCGTC GTCGTCCTGG CGGCGATGGC GTACGTGCTG
CTCGCCACCC GCGTCGGGCG GGCCACCCGC GCCGTCTCGG ACAACCCCGC CCTCGCCTCG
GCGTCGGGGA TCGACGTGGA GTCCATCGTG CGCGGCGTCT GGGTGACGGG CGCGGCACTC
GCCGCCCTCG GCGGCACCCT GCTCGGGCTC TACCTCAACG CGACGCGGTG GAACACCGGG
ACCACCCTGC TGCTGCTCAT GTTCGCCGCC GTCACGCTCG GCGGGCTCGG CGCCGCCATG
GGAGCGCTCG TGGGGTCCAT CGCCATCGGG CTCGTCGTCG AGCTCTCCAC CCTCGTCCTC
CCGAGCGACA TGCGCTACGC GAGCGCGCTC GTCATCCTCA TCCTCGTCCT GCTGTTCCGT
CCGCAGGGCA TCCTCGGCCG CGCGGAACGC GTGGGGTAG
 
Protein sequence
MHPRVLRPEG RRAVGRRVAL GPPRRWHGPL VVAVTLALAV LALLNVSAGP AAAQPAGCVP 
DAETACITGT IRTEAGEGAA GIVITVTGGP EELTATTGDD GRWAVAITEA GEYVVELDTA
TLPAGETLRD PGANPRTVTA NLGSTVAAAF PLGPPTGGGE PTEAATDEGE DDQTTAPPAG
SGDEGGVTES AETAASGGDL GTRVLQLTLS GLVFGLLLAL ASVGLSLIYG TTGLSNFSHG
ELVTLGGIVA YIAAQWWGLS LFLAGLVAVV VGAIMGYAQN AVLWAPLRRR GVGITQQMIV
TIGLAVALQY ALHLIVGGNP LRISTANPPI IDLGPVRITQ TSAISVGIAV VVLAAMAYVL
LATRVGRATR AVSDNPALAS ASGIDVESIV RGVWVTGAAL AALGGTLLGL YLNATRWNTG
TTLLLLMFAA VTLGGLGAAM GALVGSIAIG LVVELSTLVL PSDMRYASAL VILILVLLFR
PQGILGRAER VG