Gene Bcav_2160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2160 
Symbol 
ID7859521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2430529 
End bp2431410 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content69% 
IMG OID643866252 
Productprotoheme IX farnesyltransferase 
Protein accessionYP_002882174 
Protein GI229820648 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) 
TIGRFAM ID[TIGR01473] protoheme IX farnesyltransferase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGGGCGA AGGTCGGCGC GTACGTCGCG TTGACGAAGC CGCGGATCAT CGAGCTGCTG 
CTCGTCACGA CGCTGCCCAC GATGATCCTC GCGGCGGGCG GCTGGCCAGG TTGGTGGCTC
GCGATCGCGA CCCTCGTGGG TGGTGCGTTC GCCGCCGGCT CCGCGAACAC GCTCAACTGC
TACATCGACC GCGACATCGA CCAGGTGATG GCGCGGACGC GGAAGCGTCC GCTCGTCACG
GGTGCTGTGA CGCCTCGCGA GGCGCTCGTG TTCGGCCTCG TGCTCGGCGT CGTCGCGATC
GCTTGGTTCG CGGTGTTCGT GAACGTCGTC GCGGCGGCGC TGACGCTCAC GGCGATCCTG
CTCTACGTGG TCGGCTACAC GCTGATCCTC AAGCGTCGGA CGTCCCAGAA CATCGTGTGG
GGCGGTTCCG CCGGGTGCAT GCCCGTGCTC ATCGGCTGGT CCGCCGTCAC CGGCGGCCTC
GACTGGGCCG CTCTCGTGCT GTTCGGGGTG ATCTTCTTCT GGACGCCGCC GCACTACTGG
CCGCTGTCGA TGAAGTTCAA GCGCGACTAC GCGAGCGCGA ACGTGCCGAT GCTCCCGGTC
GTCGCGGCGG ACACGAAGGT CGCCCGCGAG ATGGTGGCGT ACGGCGTGGC GATGGTGGCG
TGCACGCTGG TGCTGATCCC GGTGGCCGGG ATGGGCTGGC TGTACACGGC GACGGCGGTG
GCCGCCGGTG CGTGGTTCAT GTGGGCGTGC ATCGGGCTGT ACCGGCGTGC CGTCGGGCGC
GCGCCCGGGA AGCTTCACGC GATGAAGGTG TTCCACGCCT CGATCACGTA CCTCACGCTG
GTGTTCGTGG CGATCGCGGT CGATCCGTTC CTGCCGTTCT GA
 
Protein sequence
MRAKVGAYVA LTKPRIIELL LVTTLPTMIL AAGGWPGWWL AIATLVGGAF AAGSANTLNC 
YIDRDIDQVM ARTRKRPLVT GAVTPREALV FGLVLGVVAI AWFAVFVNVV AAALTLTAIL
LYVVGYTLIL KRRTSQNIVW GGSAGCMPVL IGWSAVTGGL DWAALVLFGV IFFWTPPHYW
PLSMKFKRDY ASANVPMLPV VAADTKVARE MVAYGVAMVA CTLVLIPVAG MGWLYTATAV
AAGAWFMWAC IGLYRRAVGR APGKLHAMKV FHASITYLTL VFVAIAVDPF LPF