Gene Bcav_2154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2154 
Symbol 
ID7859515 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2424651 
End bp2425313 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content76% 
IMG OID643866246 
Productchromosome segregation and condensation protein, ScpB 
Protein accessionYP_002882168 
Protein GI229820642 
COG category[K] Transcription 
COG ID[COG1386] Predicted transcriptional regulator containing the HTH domain 
TIGRFAM ID[TIGR00281] segregation and condensation protein B 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0900248 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTGAGA CGCCCGAGCC GATCCCCGAC GCCGACGAGG CGCCGGAGCC TGAGGGCCCG 
ACTCCGCCGG CCGCGGCCCT GCCCACCTGG TCGGAGCTCC CCGGCGGCGA GGCGGCCGCG
CTCGAGGCGG TGCTCATGGT GATCGACGAA CCGGTGGCCG CCGCACGGCT CGCCACGGTC
CTGGACGTGC CGGAGCCGCG GGTCCGCGAG CTCCTCGCGC AGCTCGCAGC CGAGTATCGC
GGGGAGGCCG ACGGCGTCCG GCCCCGCGGG TTCGAGCTGC GGGAGGTGGG GGGCGGCTGG
CGCCTGTACT CCGCCGCGGC GTTCGCCCCG GCCGTGGAGC GGCTCGTGCT CGACGGGCAG
ACCGCCCGGC TCACGCAGGC CTCGCTGGAG ACGCTCGCCG TCGTCGCCTA CCGGCAGCCC
GTCTCGCGCG GCCGCATCTC GGCGATCCGC GGCGTCAACG TCGACGGCGT GGTGCGGACC
CTGCTCGCCC GTGGGCTCAT CGAGGAGGCG GGGCAGGACG GAGACAGCGG GGCGACCCTG
TACCGCACGT CCGGCTACTT CCTCGAGAGG ATGGGGCTCG CGTCGCTCGA GGAGCTCCCG
CCGCTCGCGC CGTACCTGCC GGACATCGAG GCGCTCGACG ACGTCGACGG GACGGCCCGA
TGA
 
Protein sequence
MSETPEPIPD ADEAPEPEGP TPPAAALPTW SELPGGEAAA LEAVLMVIDE PVAAARLATV 
LDVPEPRVRE LLAQLAAEYR GEADGVRPRG FELREVGGGW RLYSAAAFAP AVERLVLDGQ
TARLTQASLE TLAVVAYRQP VSRGRISAIR GVNVDGVVRT LLARGLIEEA GQDGDSGATL
YRTSGYFLER MGLASLEELP PLAPYLPDIE ALDDVDGTAR