| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_2126 |
|---|
| Symbol | |
|---|
| ID | 7859486 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | + |
|---|
| Start bp | 2396959 |
|---|
| End bp | 2397573 |
|---|
| Gene Length | 615 bp |
|---|
| Protein Length | 204 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 643866217 |
|---|
| Product | transcriptional regulator, TetR family |
|---|
| Protein accession | YP_002882140 |
|---|
| Protein GI | 229820614 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3226] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCGGACC CGCACCCCGC CGGGCGCCCG CGCCCGCGCC CGCGACGGCA CGACCCGCGA
CGGAGGGACC GGATCGTCGA CGCATGCCTC GACGTCGTCG CGGCCGACGG CGTCGCGGGC
ACGTCCCACC GGAAGGTCGC CGCGGCCGCG GACGTGCCGC TCGGCTCGAT GACCTACCAC
TTCGCCGGCA TGACGGAGCT GCTCCACGCG GCGTTCACGC GGTTCGCCGA CGACGTCGCA
GAGCGCTTCG AGCGCCGGCT CGCCCCGGCG ACGACGACGG CGGAGGTCGC GACCGCCGTC
GTCGCGCTCA TCACGCAGGA CACGTTCGCC ACCCGCCGCG ACCTCGTCCT CACCCACGAG
CTGTACACCC TCGCCGCCCG GGAGCCGGAG TTCCGCGCGA TCACCGCCGC CTGGATGGCG
CGCAGCCGTC GGGCGCTCGA GCAGCACGTC GACCCGACCA CGGCGCGACT TCTGGACGCT
CTCGTCGAGG GTCTGACGAT CCACCGCGCG CTGGACACCG GCGAACGCGA CGAGGCGGCC
GTCGTCGTCG GGATCCAGCG GATCATGGCG GAGCCGACGA CGGCGACGCC GCACGCCACG
CCGGAGTCTC GCTGA
|
|---|
| Protein sequence | MPDPHPAGRP RPRPRRHDPR RRDRIVDACL DVVAADGVAG TSHRKVAAAA DVPLGSMTYH
FAGMTELLHA AFTRFADDVA ERFERRLAPA TTTAEVATAV VALITQDTFA TRRDLVLTHE
LYTLAAREPE FRAITAAWMA RSRRALEQHV DPTTARLLDA LVEGLTIHRA LDTGERDEAA
VVVGIQRIMA EPTTATPHAT PESR
|
|---|
| |