Gene Bcav_2121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2121 
Symbol 
ID7859481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2390645 
End bp2391793 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content71% 
IMG OID643866212 
ProductEndonuclease/exonuclease/phosphatase 
Protein accessionYP_002882135 
Protein GI229820609 
COG category[R] General function prediction only 
COG ID[COG3568] Metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCCGGA TCGCGTCGTT CAACGTCGAG AACCTGTTCG CGCGCCCGAA GGCGTTCGAC 
ACCCGCGACT GGGCCGCCGG CGAGCCCGTG CTCGCCGCCT ACAGCGAGCT CAACGCGCTC
ATCGCGCAGG ACGCGTACAC CGAGCAGGAC CGGGAGCGGA TGCGCGAGCT CCTCGTGGTC
CTCGGCATCT ACTACGTGAA CTCGCACGGG GCGGTGCGAC GCCGGCAGAG CGCGGATCCG
CCCTGGGCGT GGCTGCGCAA GAACCGCGGG ACGTTCGACA CCGAGCCGCG GGACACGACG
CGCGACATCG AGATCATCGC CACCGGCCGC GGGATGTGGA TCGGGTGGGT GGAGCTCGCC
GTCGAGGCCA CGGACGAGAC CGGGATACGG ATGACGGCGC GCGTCGTGCA CGACGTGGAC
GCCGACGTCC TCGCGGTCAT CGAGGCGGAG GACCGCCCGG CCCTGCTCCG GTTCGACGCG
GAGCTGCTCG GCGACCACTA CCGGCACCTC ATGCTCGTCG ACGGCAACGA CGAGCGCGGC
ATCGACGTCG GCCTGCTCAC CAAGCCCGGG TTCCCGATCG GGGCGATCCA CTCGCACGTC
GACACGGAGG ACGCGGTCGG CCTGGTGTTC AGCCGTGACT GCGCGCAGTA CGAGGTCACC
ACGCCGTCCG GCACGGTGAT CCAGGTGCTC GTCAACCACT TCAAGTCGCA GTCCGGTGGC
GGCGGCGAGC GACGTCGACG TCAGGCGGAG GCGGTCCGGG CGATCGTCGA CGAGCTCGTC
GCGGTGGGGG AGCACGTCGT CGTGCTGGGG GACCTCAACG AGGGCTCACC GGCCGTGGGA
CAGGTGCCGG TCAGCCTCGC CGCCCTGTTC GAGAGCGACG GGCCGCTGGT CTCGTGCTTC
GACCTCGACG GCTTCGACGT CGGACCCCGG CCCGGGACGT TCGACTCGTG CGGGATCCGC
AACCGGCTCG ACTACATCCT GCTGTCCCGC GGTCTGGCCG CGAGGTTCAC GTCGGGGCGC
GTGTTCCGCA CCGGCCTGTG GGGTACCCGC GTGACCCGCC CGACGGCGTG GGAGACGTAC
CCGGAGATGC TCACCGGCAC GCACCAGGCG TCGGACCACG CGGCGCTCGT CGTCGAGCTC
GACATCTAG
 
Protein sequence
MVRIASFNVE NLFARPKAFD TRDWAAGEPV LAAYSELNAL IAQDAYTEQD RERMRELLVV 
LGIYYVNSHG AVRRRQSADP PWAWLRKNRG TFDTEPRDTT RDIEIIATGR GMWIGWVELA
VEATDETGIR MTARVVHDVD ADVLAVIEAE DRPALLRFDA ELLGDHYRHL MLVDGNDERG
IDVGLLTKPG FPIGAIHSHV DTEDAVGLVF SRDCAQYEVT TPSGTVIQVL VNHFKSQSGG
GGERRRRQAE AVRAIVDELV AVGEHVVVLG DLNEGSPAVG QVPVSLAALF ESDGPLVSCF
DLDGFDVGPR PGTFDSCGIR NRLDYILLSR GLAARFTSGR VFRTGLWGTR VTRPTAWETY
PEMLTGTHQA SDHAALVVEL DI