| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_2017 |
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| Symbol | |
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| ID | 7858637 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | + |
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| Start bp | 2300555 |
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| End bp | 2301442 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 643866111 |
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| Product | Shikimate dehydrogenase substrate binding domain protein |
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| Protein accession | YP_002882034 |
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| Protein GI | 229820508 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0523182 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCTGATC CCCCCGGGGA GCTCAACGCA TCGAACCGCC GCGCCGCCGT CCTCGGTCGC
CCGATCGAGC ACAGCCTCTC GCCCGTCCTG CACCGTGCAG CGTACGACGC GCTCGGCCTG
ACGTCCTGGA CGTACACGCG CCACGACGTC GGTGAGGCCG AGCTGGCGCC CTTCGTAGCC
GGGCTCGACA CGTCCTGGGC GGGGCTCTCC CTGACGATGC CGCTCAAGAA GGTGGCGCTG
GCGTGCTGCG ACCACGTCGA GCCGCTCGCC GAGCTGCTCG GCGTCGTCAA CACGCTGCTC
CTGCAGCCGG CCGGCAACGG ACGGCTCGTC GTCGGCGCGA ACACCGACGT CGCCGGGATC
GTGGCGTCCC TCGCGGAGGT TCGTGACCTC ACCGCCCGGC CGCTGCGCTC CGCCGTCGTC
CTCGGCGGTG GGGCCACGGC GATCTCGGCA CTCGCCGCAC TCGGCTCGCT GGGGGTGCGT
CGGGCGATCG TGGGTGTGCG CACCCCGGCC CGGTCGGGTG ACCTCGTGCG CGCGGCGCAC
CAGACCGGGC TCGAGCCGGA CGTCCGCCGC TGGGGGGCGG CGGCCCGAGC CGTCCCGCGG
GCCGACGTCG TCATCCAGAC CGCACCGGCC GGCGCGAGCG ACGCCGTCGC CGCGGCCTTG
GACGCGCACG GCGACCGCCT CGATCCTGCG CAGGTGCTCC TCGACGTCGT CTACGACCCG
TTCCCGACGC CGCTCGACGC GGCGTGGGAA CGGGCGGGCG GCACGGTCGC CCCGGGCTGG
CTCATGCTGT TGCACCAGGC CGCCGAGCAG GTCCGGCTCA TGACGGGCAA GGTTGCGCCC
GTGGAGGCGA TGCGCGCCGC GCTGACCGAC GCTCTGGGCG CCGGCTGA
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| Protein sequence | MADPPGELNA SNRRAAVLGR PIEHSLSPVL HRAAYDALGL TSWTYTRHDV GEAELAPFVA
GLDTSWAGLS LTMPLKKVAL ACCDHVEPLA ELLGVVNTLL LQPAGNGRLV VGANTDVAGI
VASLAEVRDL TARPLRSAVV LGGGATAISA LAALGSLGVR RAIVGVRTPA RSGDLVRAAH
QTGLEPDVRR WGAAARAVPR ADVVIQTAPA GASDAVAAAL DAHGDRLDPA QVLLDVVYDP
FPTPLDAAWE RAGGTVAPGW LMLLHQAAEQ VRLMTGKVAP VEAMRAALTD ALGAG
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