Gene Bcav_2016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2016 
Symbol 
ID7858636 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2299339 
End bp2300562 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content70% 
IMG OID643866110 
Productaminodeoxychorismate lyase 
Protein accessionYP_002882033 
Protein GI229820507 
COG category[R] General function prediction only 
COG ID[COG1559] Predicted periplasmic solute-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.658321 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0585657 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGACC TGTTCGCCGA CGAGCACGTC AGCGACCTCG AACGAATCGA GGAGATCGAG 
ATCGACCACG ACGAATCCGC CCGACGCCGG TCCGCCCGCC GCGCAGCCCG GCGCGAGGCC
GAGCTGCGCC GTCGCAAGCG CCGCCGGCGC ACGATCGCGA GCCTCGTCGT CATGATCCTC
ACGCTCGGCC TGCTCGTCGC AGGTGGCTGG TTCGTCGTGC GTCCGATGCT CAACGACCTG
GGTGGCGACC CCACCGTGAC CGACTTCCCC GGCCCGGGGG AGGACGACGT CCAGGTGGTC
GTCGCCGAGG GTGCGTCCGG GGCGGAGATC GGTCAGACGT TGCTCGACGA GGGCGTCGTG
GCGACCGTCG ACGCATTCGT GGACGCCTAC AACGCGAACG CCAACGCCAC CCAGATCCAG
CCGGGCACGT ACAACCTCCA GACGAAGATG GCGGCTGCGG ACGCCGTGCG CGCGCTGCTG
GACCCGTCCG CGCGGGCCGA CTCCACGATC ACCATCCCTG AGGCGTGGAC CGCCGCTCAG
ATCTACGAGC GGGTGGCGAA CGTCCTGGGG GTGCCCCTCG AAGACGTCCA GACGGCGGCG
AGCGACCCCG CGAGCCTCGG CCTGCCGGCA GACATCAACA CGAATGCGGA CGTGATCGAT
CCGCTCGAAG GCTGGCTTGC CCCCGGCACC TACTCGGCGG AGCCCGGCGC TACGCCCACC
GACGTGCTCT CACAGATGGC GGCTCGTCAG CTCACGGTGC TCGACGAGGC CGGGGTGGCT
CCGGAGGAGC GACTCCGCGT CCTCACCATC GCGTCGATCG CAGAGCGCGA GGTCGCGAAC
GCCGACTACT ACGGCCAGGT CGCCCGCGTG ATCGAGAACC GGCTGGTGGA GGGCAACGCG
ACGGGCGCGA CGACGCTCGG GATGGACTCC ACGCTGTCCT ACGCCCTGGG CCTGCCGGCG
AACGAGATCG ACCACAACCA GGACCACCCG TACAACACCC GTGTGCGGCC GGGTCTCCCG
CCGTCGCCGA TCGCCACGCC GCGCCCGGAG GCGATCGCTG CAGCGGTCAG CCCGACCGAG
GGGGACTGGC TGTTCTTCGT CACCCTGGAC CTGTGCTCGG GTGAGACGGA GTTCACGAGC
AGCTCGGCGG AGTTCGAGGA TCTTGCCGCT CAATTCCGGG CGTGGTTCGA CGAGTACGAG
GCGAACGGCA GCGAGTGTGG CTGA
 
Protein sequence
MSDLFADEHV SDLERIEEIE IDHDESARRR SARRAARREA ELRRRKRRRR TIASLVVMIL 
TLGLLVAGGW FVVRPMLNDL GGDPTVTDFP GPGEDDVQVV VAEGASGAEI GQTLLDEGVV
ATVDAFVDAY NANANATQIQ PGTYNLQTKM AAADAVRALL DPSARADSTI TIPEAWTAAQ
IYERVANVLG VPLEDVQTAA SDPASLGLPA DINTNADVID PLEGWLAPGT YSAEPGATPT
DVLSQMAARQ LTVLDEAGVA PEERLRVLTI ASIAEREVAN ADYYGQVARV IENRLVEGNA
TGATTLGMDS TLSYALGLPA NEIDHNQDHP YNTRVRPGLP PSPIATPRPE AIAAAVSPTE
GDWLFFVTLD LCSGETEFTS SSAEFEDLAA QFRAWFDEYE ANGSECG