| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_1997 |
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| Symbol | |
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| ID | 7858617 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | + |
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| Start bp | 2274786 |
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| End bp | 2275862 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643866091 |
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| Product | protein-export membrane protein SecF |
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| Protein accession | YP_002882014 |
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| Protein GI | 229820488 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.498449 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0822875 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAGCT TCGCCAAGTT CGGCAACGAC CTCTACACCG GGCACCGGTC CTACGACATC
GTCGGGCGCC GGAAGACGTG GTTCCTCATC GCCCTCGGGC TCATCGTCAT CTCCGGCCTG
CTCGTGGGGA TCCGCGGGCT CAACCCCGGG ATCGAGTTCC GCGGCGGCTC GGAGTTCGTG
GTGTCCGAGG CCTCGACCAC GGACCAGGAG CTCGCTCAGG AGGTGCTCGA CGGGATCGCG
CCCGAGCAGG TCGCACGCGT GTCGATCGTC GGTTCGTCGA CCGTCCGCGT CCAGACGGAC
CAGCTGACCA ACGAGCAGAC CGACGAGATG CAGATCGCCC TCGCCGAGGC GTACGGCGTC
CCGACCGAGC AGGTCACGTC GTCGTTCGTC GGCCCCACGT GGGGCCGTGA CGTCACGACG
AGGGCGCTTC AGGGCCTCGT GACGTTCCTC GCCATCGTCA GCGTGGTCAT GGCGGTGTAC
TTCCGCACGT GGACGATGGC GGCGGGTGCG CTCATCGCGC TCGTGCACGA CCTCATCGTC
ACGGTCGGGC TGTATGCCGG GGTGGGCTTC GAGGTCACAC CAGCGACGGT TATCGGGTTC
CTCACGATCC TCGGGTACTC GCTGTACGAC ACGGTCGTGG TGTTCGACAA GGTGCGCGAG
AACACGTCCG GGATCACCGA GCAGACCCGG GTCACCTACG CCGAGGCCGC GAACCTCGCC
GTCAACCAGA CCATCGTGCG CTCGATCAAC ACGTCGGTCG TGGCGGTGCT GCCGGTCGCG
TCCATCCTGT TCGTCGGAGC GCTGCTCCTC GGCGCCGGCA CGCTGCGCGA CATCGCGCTC
GCGCTGTTCA TCGGCACGAT CGTCTCCACG GCGTCGTCGA TCTTCATCGC GACGCCGGTG
TTCGTCGCCT TCCGGGAACG GCAGCCGCAG ATCGCCGCGC ACACGCGCAA GGTGCTCGAG
CTGCGCGCGA AGAACGGTGC CGACGCCGAG ACGCCCGAGC AGGTCGTGGT CGGCGGCCTC
GTGGCCGGCG AGCACCAGGG TGTCGCCGCG CAGCCCCGGC GCAAGCGGAA GCGCTGA
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| Protein sequence | MPSFAKFGND LYTGHRSYDI VGRRKTWFLI ALGLIVISGL LVGIRGLNPG IEFRGGSEFV
VSEASTTDQE LAQEVLDGIA PEQVARVSIV GSSTVRVQTD QLTNEQTDEM QIALAEAYGV
PTEQVTSSFV GPTWGRDVTT RALQGLVTFL AIVSVVMAVY FRTWTMAAGA LIALVHDLIV
TVGLYAGVGF EVTPATVIGF LTILGYSLYD TVVVFDKVRE NTSGITEQTR VTYAEAANLA
VNQTIVRSIN TSVVAVLPVA SILFVGALLL GAGTLRDIAL ALFIGTIVST ASSIFIATPV
FVAFRERQPQ IAAHTRKVLE LRAKNGADAE TPEQVVVGGL VAGEHQGVAA QPRRKRKR
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