Gene Bcav_1987 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1987 
Symbol 
ID7858607 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2267059 
End bp2267673 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content75% 
IMG OID643866081 
ProductNUDIX hydrolase 
Protein accessionYP_002882004 
Protein GI229820478 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00587721 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGACCCCGG CCTCGTCGGT GGGGCACCCC ACCGACGGCG AGGGATGGGT GCGGGGCGCC 
GACGGCGTCC CGTTCCGCCG CGCTGCGCGG GTGCTGCTGC TCGACCCTCA GGACCGCGTG
CTGCTGGTCC GGGGCCACGA CGCCGACCAG CCCGAGCGGA CGTGGTGGTT CACCGTGGGC
GGCGGGATCG ACCGGGGGGA GACGGCCCGC GACGCCGCCG TGCGGGAGGT GTTCGAGGAG
ACGGGCCTGC GGCTCGACCC GGAGCGGCTC GAGGGCCCGG TGCTGACCCG CAGCGCGCTG
TTCGACTTCT TCGCGCGCAC GGTCCGGCAG GACGAGGAGT TCTTCCTCGC GCGCCTCGAC
GGTCTGGATC GGGACGCGCC GCTCGTCACC GACAACTGGA CGGACGTCGA GCGAGCGTTC
ATGGACGAGG TCCGGTGGTG GCCGCTCCCG GCGCTGGCGC AGGTCACCGA GGAGGTGTTT
CCCGCGGAGC TCGTCGAGGT CACCCAGGCG CTCCTGCCCG GGTGGAACGG CGTCACGCGA
CACCTCGGCC TGGCCCGGGA CGAGGCCGCC ACGGGCGACT CGAGCACGCC CGCGAGCGGT
GGCTCCGGTC GATGA
 
Protein sequence
MTPASSVGHP TDGEGWVRGA DGVPFRRAAR VLLLDPQDRV LLVRGHDADQ PERTWWFTVG 
GGIDRGETAR DAAVREVFEE TGLRLDPERL EGPVLTRSAL FDFFARTVRQ DEEFFLARLD
GLDRDAPLVT DNWTDVERAF MDEVRWWPLP ALAQVTEEVF PAELVEVTQA LLPGWNGVTR
HLGLARDEAA TGDSSTPASG GSGR