Gene Bcav_1964 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1964 
Symbol 
ID7858357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2240079 
End bp2240822 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content78% 
IMG OID643866054 
Productputative lipoprotein 
Protein accessionYP_002881981 
Protein GI229820455 
COG category[H] Coenzyme transport and metabolism
[R] General function prediction only 
COG ID[COG2045] Phosphosulfolactate phosphohydrolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0700691 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000413704 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGAGCACTG CCGACGACGC CGTCCGGCTC TCCCAGTCCG GGGCGCGGGT CCGGTTCGGC 
TGGGGACCGC AGGCGGTGCG GCGCTTCCCC GCGACCCATG TGGTCGTCGT CGACGTCCTG
CGCTTCACGA CGGCCGTCGA CGTCGCCGTC TCCCACGGAG CGCGCGTACA TCCGTACCGG
TGGCGGGACG GCGGCGCGGG CCACCTGGCC GCGGAGACGG GCGCACACCT GGCCGACGGG
TCGTCCTCGC CGTACTCCCT GTCCCCCGCC AGCCTGGCCG GGCTGAACCC GGGGGACGCC
GTCGTCCTCC CCTCCCCGAA CGGCTCGACG TGCGCGGCCC TGGCCCACGA GCGGGGCGCC
GTCGTGCTCG CCGCGTGCCT GCGCAACGCG GCGGCCGTCG CCGCCTGGCT GGACGGGACC
GGCGCCGAGG ACGTGCTGGT CGTCGCGTGC GGCGAGCAGT GGCCGGACGG GGCCGGTCTC
CGGCCGGCGC TGGAGGACGA GCTCGGCGCG GCGGCCGTCG TCGCGCAGCT GGGCGGTTCC
CGGTCCGCCG AGGCCGACGC CGCGGCCCGG CTGTGGACGG CGTGCGCCGA CGGCGCCGCG
GATCTCGTGC GCGGATCGGC GTCCGCGGCC GAGGCTCGCA GCCGGGGCTG GCACGACGAC
CTGGAGCTGG CGTGCCGGGT CGGGGCCTCC GACGCGGTTC CTCTCCTGCT CGACGGCGCG
TTCTCGGACG GCTCCAGGCG GTAG
 
Protein sequence
MSTADDAVRL SQSGARVRFG WGPQAVRRFP ATHVVVVDVL RFTTAVDVAV SHGARVHPYR 
WRDGGAGHLA AETGAHLADG SSSPYSLSPA SLAGLNPGDA VVLPSPNGST CAALAHERGA
VVLAACLRNA AAVAAWLDGT GAEDVLVVAC GEQWPDGAGL RPALEDELGA AAVVAQLGGS
RSAEADAAAR LWTACADGAA DLVRGSASAA EARSRGWHDD LELACRVGAS DAVPLLLDGA
FSDGSRR