| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_1951 |
|---|
| Symbol | |
|---|
| ID | 7858344 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 2223422 |
|---|
| End bp | 2224879 |
|---|
| Gene Length | 1458 bp |
|---|
| Protein Length | 485 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 643866041 |
|---|
| Product | inosine 5-monophosphate dehydrogenase |
|---|
| Protein accession | YP_002881968 |
|---|
| Protein GI | 229820442 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0516] IMP dehydrogenase/GMP reductase |
|---|
| TIGRFAM ID | [TIGR01302] inosine-5'-monophosphate dehydrogenase
[TIGR01303] IMP dehydrogenase family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.00883766 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCGTTTCC TGCCGGGGCA GAACCCCACG ACGGATCTCA CGTACGGCGA CGTGTTCCTC
GTCCCGTCCC GGTCCGACGT CGCCAGCCGG TTCGACGTCG ACCTCACGCC GGTGGACGGC
ACCGGACCGA CGATCCCCGT CGTCGCCGCG AACATGACAG CCGTCAGCGG ACGGCGGATG
GCAGAGACCC TCGCCCGGCG CGGGGCGATG GGGATCCTGC CGCAGGACAC GCCCACCGAC
GTCGTGACCG ACGTCGTCGA GTGGGTCAAG TCCCGGCACG CGATCGTCGA GAGCGCCGTC
ACGATCCGTC CGGACGACAC CGTGCACGAC GTCGTCGCCC TCATCGGCAA GCGGTCGCAC
GGCGCGGCGG TCGTGGTCGA GCAGGACCGC CCCGTCGGCA TCGTGACGCT CGCCGACTGC
CAGGGCGTCG ACCAGTTCAC CCAGGTGCGC GACGTCATGG CCGCGCGCCC GGAGGTGCTC
GGCGCCTCGA CCCTCGACGG ACCGGACGCC CTCGCCGCCG CGTACACCCA GCTGCACGAG
GCACGCCGCA AGATCGTCCC GGTGGTCGAC GACGCGGCCG GCGGTGCCCT GATCGGCGTG
CTGACCCGCA CCGGCGCCCT GCGCTCGAGC ATCTACCCGC CGGCGCTCGA CGGCGCCGGC
CGGCTCCGCG TCGGGGCGGC GGTCGGCGTG CGGGGCGACG TCGGCGCGCA CGCCAAGGAG
CTGGTCGCGG CGGGCGTCGA CCTGCTCGTG GTCGACACCG CGCACGGCCA CCAGGAGCAG
ATGCTGGAGG CGCTCCGCGC GGTCCGCGCC ATCGACCCCG GTGTGCCGGT GGTGGCCGGC
AACGTCGTGA CGGCCGACGG CGTCACCGAC CTCGTCGAGG CGGGTGCGGA CATCGTCAAG
GTCGGCGTCG GGCCCGGTGC GATGTGCACC ACGCGGATGA TGACCGGCGT CGGTCGCCCC
CAGTTCTCCG CCGTCCTCGA GTGCGCCGGC CGCGCCCGCG AGCTCGGCGC GCACGTGTGG
GCCGACGGCG GGGTGCGGCA CCCGCGCGAC GTGGCACTGG CGCTGGCCGC CGGTGCGTCG
CAGGTCATGA TCGGCTCCTG GTTCGCCGGG ACGCACGAGT CGCCTGGCGA CCTGCACACC
GACGGGACCG GACGCCAGTA CAAGGAGAGC TTCGGCATGG CCTCGGCGCG CGCCGTGGCC
GCCCGGACCC GTGCGGGCTC GCCGTTCGAG CGCGCCCGCA AGGCCCTGTA CGAGGAGGGC
ATCTCGTCGT CGCGCATGTA CCTCGACCCG GACCGGCCCG GCGTCGAGGA CCTCCTCGAC
CAGATCACAG CGGGTCTGCG CAGCGCCTGC ACGTACGCCG GAGCGCGCAC GCTGGCCGAG
TTCGCCGACC GCGCCGTCGT CGGGATCCAG TCCGCGGCCG GGTACGAGGA GGGTCGCCCG
CTGCCCGTCG GGTGGTGA
|
|---|
| Protein sequence | MRFLPGQNPT TDLTYGDVFL VPSRSDVASR FDVDLTPVDG TGPTIPVVAA NMTAVSGRRM
AETLARRGAM GILPQDTPTD VVTDVVEWVK SRHAIVESAV TIRPDDTVHD VVALIGKRSH
GAAVVVEQDR PVGIVTLADC QGVDQFTQVR DVMAARPEVL GASTLDGPDA LAAAYTQLHE
ARRKIVPVVD DAAGGALIGV LTRTGALRSS IYPPALDGAG RLRVGAAVGV RGDVGAHAKE
LVAAGVDLLV VDTAHGHQEQ MLEALRAVRA IDPGVPVVAG NVVTADGVTD LVEAGADIVK
VGVGPGAMCT TRMMTGVGRP QFSAVLECAG RARELGAHVW ADGGVRHPRD VALALAAGAS
QVMIGSWFAG THESPGDLHT DGTGRQYKES FGMASARAVA ARTRAGSPFE RARKALYEEG
ISSSRMYLDP DRPGVEDLLD QITAGLRSAC TYAGARTLAE FADRAVVGIQ SAAGYEEGRP
LPVGW
|
|---|
| |