Gene Bcav_1949 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1949 
Symbol 
ID7858342 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2221931 
End bp2222605 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content76% 
IMG OID643866039 
ProductNUDIX hydrolase 
Protein accessionYP_002881966 
Protein GI229820440 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0130031 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAC CGACGCCCAC CGGCGCGCGT GCCCAGCTCC TCGCCCTCGC CCGGGACAAC 
CGCGCCCTGC CGATCCCGGG GCGCAGCCCC GACCCGTCGG CACGACGCTC CGCCGTCCTC
GTGCTGTTCG GCGTGCTCGA CACCGTCCCG GCCGCCACGC CGGCAACGCC CAACGTCGCG
GCCGACCTCG ACGTCCTGCT GACCCGGCGC TCCCCTGACC TGACCCACCA CCCCGGCCAG
ATCGCGTTCC CCGGCGGCGG GATCGATGAC GATGACGGCG GTCCCGAGGA CGCCGCCGTG
CGCGAGGCGG TCGAGGAGAC CGGCCTCGAT CCGGCCGGCG TCGAGGTCCT GGGCAGGCTC
GGCGACCTCG GTCTGCCGGT GAGCGACAAC GTCGTGACGC CGGTCCTCGC CTGGTGGGCG
ACGCCGTCGC CCCTCGTGCC GGACGGCACG GAGACCGCCG AGGTCTTCCG CGTCCCGGTC
GCGGACCTGG TGGATCCCGG GAACCGGCGG ACGACGGCGA TCACGCGCGG GTCGGAGACG
TGGCGCGGCC CGGCGTTCGA GGTGGCGGAC CGCGTGGTCT GGGGCTTCAC GGCGATGGTG
CTCGACGCCC TCCTGGACGC GCTCGGTTGG TCGGAGCCCT GGGACCGCCG CCGCGAGATC
CCCGTGCCGC TCTGA
 
Protein sequence
MSEPTPTGAR AQLLALARDN RALPIPGRSP DPSARRSAVL VLFGVLDTVP AATPATPNVA 
ADLDVLLTRR SPDLTHHPGQ IAFPGGGIDD DDGGPEDAAV REAVEETGLD PAGVEVLGRL
GDLGLPVSDN VVTPVLAWWA TPSPLVPDGT ETAEVFRVPV ADLVDPGNRR TTAITRGSET
WRGPAFEVAD RVVWGFTAMV LDALLDALGW SEPWDRRREI PVPL