| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_1941 |
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| Symbol | |
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| ID | 7858334 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | - |
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| Start bp | 2209592 |
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| End bp | 2210317 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643866031 |
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| Product | TrkA-N domain protein |
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| Protein accession | YP_002881958 |
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| Protein GI | 229820432 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0569] K+ transport systems, NAD-binding component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0298197 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGCGTCG TGATCGCGGG CGCGGGGAGC GTGGGCCGCT CGATCGCCCG GGAGCTGCTC
GGACACGCCC ACGAGGTGCT GCTCATCGAC CGTCAGCCGA GCGCGATGCG GGTGGCGAGC
GTGGCCGACG CGGACTGGCT GCTCGGCGAC GCGTGCGAGA TCAGCACGCT CGTGGAGGCG
CGGCTCGAGG AGTGCGACGT CGTCGTCGCC GCCACGGGCG ACGACAAGGT CAACCTCGTC
CTCAGCCTGC TCGCGAAGAC CGAGTTCTCC GTGCCGCGCA CCGTCGCGCG CGTCAACAAC
CCGAAGAACG AGTGGATGTT CGACGACGCC TGGGGGGTCG ACGTCCTCGT CTCGACCCCA
CGGATCATGA CCGCCCTCGT CGAGGAGGCG GTGAGCGTCG GCGACCTCGT GCGGATCTTC
ACGTTCCACT CGTCCGGCGC GAGCATGTAC GAGCTCACGC TCGCGGACGA CTCCCCGCTC
GTGGGCCGCC GCGTCGGTCA GGTCGCGTGG CCGCCCGACG TCGTGCTGGC CGCGGTGATC
CGCGGTGCGC GACCCATCTC ACCGAGTCCG GACGACACCC TCGAGGGTCA CGACGAGCTC
GTGTTCATCG TGTCGGAGGA GCCGGGGAGC GGGGATCGTG CGGCTCTCGC GCTGCAGGAG
CTACTAGAGG GCGGACCAGC ACCCACGTCA GCCACAGCAC CAACGCCCAC AGCGGAAGCC
CCATGA
|
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| Protein sequence | MRVVIAGAGS VGRSIARELL GHAHEVLLID RQPSAMRVAS VADADWLLGD ACEISTLVEA
RLEECDVVVA ATGDDKVNLV LSLLAKTEFS VPRTVARVNN PKNEWMFDDA WGVDVLVSTP
RIMTALVEEA VSVGDLVRIF TFHSSGASMY ELTLADDSPL VGRRVGQVAW PPDVVLAAVI
RGARPISPSP DDTLEGHDEL VFIVSEEPGS GDRAALALQE LLEGGPAPTS ATAPTPTAEA
P
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