Gene Bcav_1913 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1913 
Symbol 
ID7858306 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2178891 
End bp2179286 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content73% 
IMG OID643866004 
ProductUspA domain protein 
Protein accessionYP_002881931 
Protein GI229820405 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0013645 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCGATCG TCGTGGGCTA CCTGGCCACC GCGGAAGGGG AGGCCGCTCT CGAGGCGGCT 
CTCGCCGAGG CGAGGCGCCG CGAGGACCGC CTGGTCGTCG CCGTCTCGCA GCGACGCGGG
GACGACGACG CGGCCGGTCT GGAGGAGCGC ATCGAGGCGG TCCGCGACCG GCTCGACGCC
GAGGGCGTCG GGTACGAGGT CCGGCAGGTG CAGCGCGGCA GCGACGTCGC CGACGACCTC
ATCGCCATCG CGGAGGAGAC CGACGCGTCG CTCATCGTCA TCGGGCTGCG CCGGCGCTCA
CCGGTGGGCA AGCTCATCCT CGGCTCCAAC GCCCAGCGCA TCCTGCTGGA CGCACCCACC
CCCGTGCTGG CGGTGAAGTC CGCAGGAGAG CGGTGA
 
Protein sequence
MPIVVGYLAT AEGEAALEAA LAEARRREDR LVVAVSQRRG DDDAAGLEER IEAVRDRLDA 
EGVGYEVRQV QRGSDVADDL IAIAEETDAS LIVIGLRRRS PVGKLILGSN AQRILLDAPT
PVLAVKSAGE R