Gene Bcav_1912 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1912 
Symbol 
ID7858305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2177666 
End bp2178808 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content78% 
IMG OID643866003 
Producthypothetical protein 
Protein accessionYP_002881930 
Protein GI229820404 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00165676 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCCCCT CATCCTCAGC CCCGCGTCCC ACCTCCGGAT CCGCCGACGT CGTCCCTGTC 
GTCCGCGCCA GCGAGCCACG CGAGATGCTC GCGTTCCTGC CCTACGCCGT GGGGTTCCAC
CCCAGCGACT CCGTGGTGGT GGCCTCGCTG CGCCCGCCAC GCGGCCGGAT CGGCCTCGTC
GCGCGCCTCG ACACGGCCGA TCTCGCGGGT CCGGACGGCG ACGCCGTCGC CGCCGCCCTC
GCGCACCACC TCGCCCGCGA CGGCGCGAGG CGCGTGTTCG TGGCCGTCTA CACCGACCTG
GATCCGGCCG AGGCGCGTGA GCCCGGGAGC GTCCCGGCGC GAGCTCTCGG TGCGTTCCTG
GCGACGCCCG AGCTCCCCGA GGTGCTCGAG CCGTGGGTGG TCGGCCGCAG GGGGTACGCC
GGGTGGCGAT GCGCGGACGC CACCTGCTGC CCGGCTGCCG GCCGGCCGCT GCGCGAGCTG
GACGGGACGC AGGTGGCTGC GCACATGGTG CTCGCGGGCG AGCGGCCCGC CCGGGACAGG
TCGGATCTCG TGCCGCGACC GGAACCGAGC GGGCCGCGCC GTCGCGCGGC AGCCGCTGCG
GCTCGGCGCG TGCGCCTCGC GCCCGGGGCG TCACGGTCCG AGCTCGCGGC ATGGCGTGCC
GAGCGGGCCG AGCAGGTGAT CGGGCTGCTC GACGACGCCG ACGGCGGCGG TGCCGGGCCC
GCTCCTCGGG CGCTCGGCGA GCTGGCGGCC GGGCTCGCTG ACACCGGCGT GCGGGACGTC
GTGCTCGCGT GGCTCGTGCA CCACGGCGTG GGAGCCGGGG CGTGCCCGAG CACGGGCGCC
TGCGACCTCG ACGTCGGGGC GGCGCTCGGT GCCGTGTTCC GACCGGGCGG CGTGCAGCCG
CGTCCCGCGC TCCTCGCGCC GGCCCAGGGC GTGCTGGAGG CGGCCGCACG GGTGGCCCCG
AGAGCGACGC GGGTGCACGT CCTCACCACG TTGGCGTGGG TGGCGTGGTG GAGCGGCGAG
GGTGCACGGG CGGGTGCCCT GCTCGAGGCC GCGCTCGTGC TCGACCCGGA CCACGCGCTC
GCCGGACTCC TGGACGCGAC GCTCGCGGGA GGGATCCCGC CCGGGTGGGC ACGTTCGGCC
TGA
 
Protein sequence
MSPSSSAPRP TSGSADVVPV VRASEPREML AFLPYAVGFH PSDSVVVASL RPPRGRIGLV 
ARLDTADLAG PDGDAVAAAL AHHLARDGAR RVFVAVYTDL DPAEAREPGS VPARALGAFL
ATPELPEVLE PWVVGRRGYA GWRCADATCC PAAGRPLREL DGTQVAAHMV LAGERPARDR
SDLVPRPEPS GPRRRAAAAA ARRVRLAPGA SRSELAAWRA ERAEQVIGLL DDADGGGAGP
APRALGELAA GLADTGVRDV VLAWLVHHGV GAGACPSTGA CDLDVGAALG AVFRPGGVQP
RPALLAPAQG VLEAAARVAP RATRVHVLTT LAWVAWWSGE GARAGALLEA ALVLDPDHAL
AGLLDATLAG GIPPGWARSA